Problem when reading tab-delimited SNP data files when sex is unknown

diyabc / diyabcGUI

User interface to DIYABC/AbcRanger

https://diyabc.github.io/

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Problem when reading tab-delimited SNP data files when sex is unknown #30

Closed gdurif closed 4 years ago

gdurif commented 4 years ago

Potential source of the problem:

tab delimitation
unknow sex (value = 9)
other?

Following error: "Issue with data file. Issue with IndSeq SNP data file content: 'SEX' column should contain only 'F' for female or 'M' for male (see manual)."

gdurif commented 4 years ago

Fixed in afcbd73

missing values were not accounted for
only female ('F') column was interpreted by R as a column of boolean FALSE values