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dptech-corp
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Uni-Fold
An open-source platform for developing protein models beyond AlphaFold.
https://doi.org/10.1101/2022.08.04.502811
Apache License 2.0
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Uni-Fold Musse
#101
teslacool
closed
1 year ago
0
Uni-Fold Musse
#100
teslacool
closed
1 year ago
0
How to read the downloaded Uni-Fold dataset?
#99
shawn-hsyu
closed
1 year ago
1
how can I download the training data of multimer only?
#98
onlyonewater
closed
1 year ago
4
How did you generate eval_sample_weight.json, train_sample_weight.json etc.
#97
dingquanyu
closed
1 year ago
1
update get assembly from mmcif
#96
teslacool
closed
1 year ago
0
Question about "{}_cluster_size.json"
#95
shawn-hsyu
closed
1 year ago
1
想问一下训练资源以及时间
#94
onlyonewater
closed
1 year ago
6
flash-attention support
#93
robotcator
closed
1 year ago
0
fix type after model.float()
#92
teslacool
closed
1 year ago
0
Using Template PDB files
#91
babaid
opened
1 year ago
3
training error
#90
WeianMao
closed
1 year ago
1
add script for label extraction
#89
teslacool
closed
1 year ago
1
evaluation dataset
#88
WeianMao
closed
1 year ago
1
Demo Case : RuntimeError & ChildFailedError
#87
showlrr2
closed
1 year ago
4
Is the pdb data open-sourced?
#86
pengzhangzhi
closed
1 year ago
1
Flash-Attention
#85
Xreki
opened
1 year ago
8
dataset down load error
#84
WeianMao
closed
1 year ago
3
how to validate modal during training
#83
WeianMao
closed
1 year ago
1
add script for the evaluation
#82
guolinke
closed
1 year ago
0
finetuning unifold
#81
helder-ribeiro
closed
1 year ago
5
Questions regarding Uni-Fold multimer evaluation
#80
SuperXiang
closed
1 year ago
2
mv to py38 to satisfy colab
#79
ZiyaoLi
closed
2 years ago
0
move colab url from google drive to github release
#78
ZiyaoLi
closed
2 years ago
0
Problems with Unifold-Symmetry Colab
#77
jfbazan
closed
2 years ago
1
refine the description of model name
#76
guolinke
closed
2 years ago
0
Add documentation about the full dataset download
#75
guolinke
closed
2 years ago
0
URL for pre-trained Uni-Fold model parameters not working
#74
ajbordner
closed
2 years ago
2
support branch parallel for evoformer
#73
GuoxiaWang
opened
2 years ago
0
refine colab notebook
#72
ZiyaoLi
closed
2 years ago
0
Python library to compare actual and predicted structure
#71
mukulem
closed
2 years ago
1
skip download af params
#70
ZiyaoLi
closed
2 years ago
0
Parameter download links wrong
#69
dominik-handler
closed
2 years ago
2
fix uf-symmetry wget url
#68
ZiyaoLi
closed
2 years ago
0
Inferencing using multiple GPUs
#67
mukulem
closed
2 years ago
2
OOM in multimer
#66
lhatsk
closed
2 years ago
8
model_5_multimer_v2 config
#65
lhatsk
closed
2 years ago
1
move model parameters to github release
#64
guolinke
closed
2 years ago
0
questions regarding cuda kernel and inference argument `model_name`
#63
pengzhangzhi
closed
1 year ago
2
could unifold support features.pkl from other method like colabfold?
#62
semal
closed
2 years ago
0
change default model name
#61
ZiyaoLi
closed
2 years ago
0
Failed to load Uni-Fold checkpoints
#60
maxshen29
closed
2 years ago
10
docker run -d -it --gpus all --net=host --name unifold dptechnology/unifold:latest-pytorch1.11.0-cuda11.3 not run
#59
maxshen29
closed
2 years ago
8
convert alphafold checkpoints failed with empty output
#58
maxshen29
closed
2 years ago
4
HMMSearch Failure reading pdb_seqres.txt for Inference
#57
bernym12
closed
2 years ago
4
trying installation on a computer with an NVIDIA RTX A4000 16GB VRAM
#56
avilella
closed
1 year ago
5
how to get pdb_labels training dataset
#55
ssn1771
closed
1 year ago
2
add the default chains.txt for single-chain fasta
#54
BaozCWJ
closed
2 years ago
0
run_uf_symmetry failed
#53
Maikuraky
closed
2 years ago
2
Refine colab notebook
#52
ZiyaoLi
closed
2 years ago
0
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