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dynverse / dyneval

Metrics to compare two or more trajectories ⚖
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Pseudogp runs out of time and out of memory #15

Closed rcannood closed 7 years ago

rcannood commented 7 years ago

I used this script to submit benchmarking jobs to PRISM.

Here are two log files: log.2.e.txt log.1.e.txt

zouter commented 7 years ago

This is a very slow method, the iter parameter should be very low, but this then leads to bad models... I think we should make the iter parameter run on an 'exponential' (geometric) scheme

On Sun, 17 Sep 2017, 09:36 Robrecht Cannoodt notifications@github.com wrote:

I used this script https://github.com/rcannood/dyneval/blob/1b8e9529cabf5bb44a4baf7169f9b85ad8ba3828/scripts/robrecht/cluster_tasks.R to submit benchmarking jobs to PRISM.

Here are two log files: log.2.e.txt https://github.com/rcannood/dyneval/files/1308912/log.2.e.txt log.1.e.txt https://github.com/rcannood/dyneval/files/1308913/log.1.e.txt

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zouter commented 7 years ago

pseudogp iter param is now geometric fd4d2a5