EANBiT 2021 Residential Training Mini-Projects
Mini-projects for the residential training. As part of the EANBiT Residential training 2022, you will collaboratively work on mini-projects in groups of at least 4.
Projects
- Project 1: Nextflow Pipeline for ONT Long Reads Metatrascriptomic data analysis
- Project 2: Stingless bees Metabarcoding
- Project 3: Long Reads Whole Genome Assembly - E Coli
- Project 4: Sea turtle Immunogenetics
- Project 5: Antelope Phylogenetics
- Project 6: Chelonid Alphaherpervirus 5 Phylogeny
- Project 7: Reproducing a Machine Learning paper
To select a project, please comment on the issue and why you'd like to tackle the mini-project. Select at least two, and specify your First, Second and Third choice.
Expected
- Work collaboratively on the project. In your report, you need to state the role played by each group member.
- Collaborate via Git & GitHub, making use of the Git Workflow.
- Assign tasks to group members using GitHub issues and learn from each other. Every group member must be knowledgeable of the whole group's work.
- A reproducible workflow should accompany your submission implemented using the workflow languages you were taught during the training.
- Document your scripts in a nice and informative way. Your scripts, programs, workflows, etc, will be reviewed as a critical part of the project assessment.
- Your writeup should be complete with visualizations.