Interpro uses more CPUs than I specified:

ebi-pf-team / interproscan

Genome-scale protein function classification

Apache License 2.0

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Closed sbthandras closed 1 year ago

sbthandras commented 1 year ago

I've launched interpro with this command (using the docker image):

interproscan_5.45-80.0_1.sif -i chunk_1.fasta -f tsv,xml -d outdir -C 2 -c -T 1_tmp

It should use 2 CPU-s but for some reason my entire HPC is flooded with CPUs until Interpro fails with the thread creation failed message.

matthiasblum commented 1 year ago

Hi @sbthandras,

Sorry for the late reply. Could you paste the entire log message?