help...Can I save the connectome file or seed correlation map not only the picture in the cifti_vis_PINT ?

[YaoMeng94]

Can the cifti_vis_PINT save all the source file of the QC_PINT picture, and my QC file have a little bit wired like that the border separate the network looks like not in the right place.

[edickie]

Thanks for the catch! I really hope this is just a plotting error (i.e. with the white lines). Will troubleshoot this weekend.

On Tue., Mar. 26, 2019, 10:53 p.m. DearBraveJohn, notifications@github.com wrote:

Can the cifti_vis_PINT save all the source file of the QC_PINT picture, and my QC file have a little bit wired like that the border separate the network looks like not in the right place. [image: image] https://user-images.githubusercontent.com/33821965/55047086-817c0200-507e-11e9-9eae-30a39ce70c81.png

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[edickie]

Thanks for catching this. It looks like it is due to a difference in seaborn/matplotlib's plotting behaviour. Will fix in the next release.

The underlying data from these plots are in the csv's from the PINT outputs. The heatmaps are generated by calculating a simple (full pearson's) correlation on the timeseries that are output in the _pvertex_meants.csv and _tvertex_meants.csv output files. (Note the _meants.csv outputs have "ROI" as rows and TR as columns). The ROI order and network is given in the _summary.csv files and should match those in the input "template" file (i.e. Yeo7_2011_80verts.csv).

[YaoMeng94]

Thanks for the answer, Erin. Really appreciate your help