elixir-europe / MARS

Multi-Repository Data Submission using ISA-JSON
MIT License
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Repository API receipt error catching #67

Open bedroesb opened 3 weeks ago

bedroesb commented 3 weeks ago

Currently, when for example no data is submitted before metadata submission, ENA will return errors in the "messages" filed. The script can currently not find accessions in those messages: https://github.com/elixir-europe/MARS/blob/main/repository-services/isajson-ena/src/main/java/com/elixir/biohackaton/ISAToSRA/sra/service/MarsReceiptService.java#L76

this needs to be captured