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Indigo
Universal cheminformatics toolkit, utilities and database search tools
http://lifescience.opensource.epam.com
Apache License 2.0
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Micro and macro structures connected through attachment points cannot be saved in Extended SMILES format in micro mode
#1992
Zhirnoff
closed
4 days ago
0
The structure changes when saved in SVG/PNG formats
#1991
Zhirnoff
opened
3 weeks ago
2
Micro and macro structures connected through attachment points cannot be saved in CML format in micro mode
#1990
Zhirnoff
closed
4 days ago
0
Convert api does not recognise IDT format during autodetection
#1989
rrodionov91
opened
3 weeks ago
0
#1912 Support unresolved IDT monomers (no structure, IDT only)
#1988
AliaksandrDziarkach
closed
3 weeks ago
0
Pull IndigoRecord attribute as the document ID for index updates in bingo-elastic
#1987
rvaidya
opened
3 weeks ago
1
System breaks IDT export line if it is longer than 80 chars
#1986
AlexeyGirin
opened
3 weeks ago
0
Error message in case of no IDT name for monomer is wrong
#1985
AlexeyGirin
opened
3 weeks ago
0
Error message is wrong if in case if position indicator in IDT code contradicts real position of the monomer in the chain
#1984
AlexeyGirin
closed
4 days ago
0
Bump to version 1.20.0-rc.3
#1983
even1024
closed
3 weeks ago
0
Cannot open some expected IDT.
#1982
NadezhdaPeskun
closed
5 days ago
1
Preview: System saves leaving group to MOL 3000 wrong
#1981
AlexeyGirin
closed
4 weeks ago
1
#1979 Preview: IDT sequence with leading or trailing spaces will not open.
#1980
AliaksandrDziarkach
closed
1 month ago
0
Preview: IDT sequence with leading or trailing spaces will not open.
#1979
NadezhdaPeskun
closed
1 month ago
2
Preview: Open an IDT file with a "*" character if the "*" is only between nucleotides (RNA presets or unsplit nucleotides)
#1978
NadezhdaPeskun
closed
1 month ago
2
#1976 Too slow monomer library load
#1977
AliaksandrDziarkach
closed
1 month ago
0
Too slow monomer library load
#1976
AliaksandrDziarkach
closed
1 month ago
1
Bump version to 1.21.0-dev.6
#1975
even1024
closed
1 month ago
0
Preview: User can save IDT with 5' phosphate but cannot open this file again.
#1974
NadezhdaPeskun
closed
1 month ago
1
#1972 - Can't save KET with nameless superatom
#1973
even1024
closed
1 month ago
0
Can't save KET with nameless superatom
#1972
even1024
closed
1 month ago
1
#1944-Fullerene and 3D molecules are not represented as 3D in the Miew 3D window
#1971
NayanaGadakh
opened
1 month ago
0
New text entities in KET-format
#1970
even1024
opened
1 month ago
1
Render api does not faithfully represent chemical structures in PNG
#1969
ihuang8
opened
1 month ago
0
Bump to version 1.21.0-dev.5
#1968
AliaksandrDziarkach
closed
1 month ago
0
#1959 Preview: Saved in the Ketcher IDT file should be opened
#1967
AliaksandrDziarkach
closed
1 month ago
0
Cannot open IDT with MOE sugar.
#1966
NadezhdaPeskun
closed
1 month ago
2
Mol file with XSS should be opened correctly as KET file.
#1965
NadezhdaPeskun
opened
1 month ago
0
Segfault when calling grossFormula() function
#1964
ihuang8
opened
1 month ago
0
Bump version to 1.21.0-dev.4
#1963
even1024
closed
1 month ago
0
Technical issue regarding indigo renderer
#1962
jjishizaki
opened
1 month ago
2
#1960 Fix error message in the SequenceLoader for an invalid sequence #1960
#1961
even1024
closed
1 month ago
0
Fix error message in the SequenceLoader for an invalid sequence
#1960
even1024
closed
1 month ago
1
Preview: Saved in the Ketcher IDT file should be opened
#1959
NadezhdaPeskun
closed
1 month ago
1
Preview: CHEM are ignored without any messages or incorrect message while we save sequence with CHEM to IDT
#1958
NadezhdaPeskun
closed
4 days ago
0
Preview: In case of peptide monomers are on canvas, error "Cannot save molecule in IDT format - monomer(s) … doesn’t have IDT code." should appear.
#1957
NadezhdaPeskun
opened
1 month ago
0
#1800 only one of the R groups is saved to CDX format
#1956
durlabh-epam
opened
1 month ago
0
Bump to indigo-1.21.0-dev.3
#1955
AliaksandrDziarkach
closed
1 month ago
0
Bump to version 1.21.0-dev2
#1954
AliaksandrDziarkach
closed
1 month ago
0
CI fix: pylint version fix
#1953
even1024
closed
1 month ago
0
#1950 Empty headers appear when exporting to FASTA
#1952
even1024
closed
1 month ago
0
Backmerge: #1950 Empty headers appear when exporting to FASTA
#1951
even1024
closed
1 month ago
0
Empty headers appear when exporting to FASTA
#1950
Zhirnoff
closed
1 month ago
1
error: bingo buffer cache binary data: internal error: can not add cmf to the cache because is not enough space
#1949
jank9201
opened
1 month ago
0
#1928 - Support monomer to molecule connections type
#1948
even1024
closed
1 month ago
0
#1878 - The structure saved in CML format does not open
#1947
NayanaGadakh
closed
1 month ago
0
#1826 - forEach, toArray, findFirst methods for ElasticStream
#1946
uladkaminski
closed
1 month ago
0
#1900 Export of modified RNA to IDT notation (modified IDT monomers)
#1945
AliaksandrDziarkach
closed
1 month ago
0
Fullerene and 3D molecules are not represented as 3D in the Miew 3D window
#1944
baranovdv
opened
1 month ago
1
#1899 Import of modified IDT monomers
#1943
AliaksandrDziarkach
closed
1 month ago
0
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