epigen / atacseq_pipeline

Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
https://epigen.github.io/atacseq_pipeline/
MIT License
47 stars 2 forks source link

add Chrom Y info to docs #45

Closed sreichl closed 2 months ago

sreichl commented 3 months ago

Just in case you're curious, the reason that some reads map to Y in females is that apparently X and Y chromosomes both have pseudoautosomal regions (PARs) that are common between the two chromosomes.

sreichl commented 2 months ago

https://github.com/epigen/atacseq_pipeline/commit/6a1c64256368963b5e8df3dfbb75af82e9a003d2