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epiverse-trace
/
simulist
An R package for simulating line lists
https://epiverse-trace.github.io/simulist/
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add reference paper for the reproduction number calculation
#151
avallecam
opened
19 hours ago
2
Vectorise `.add_hospitalisation()`
#150
joshwlambert
closed
1 day ago
0
Add defaults to all exported function arguments
#149
joshwlambert
opened
1 week ago
1
Use `NULL` for onset-to-event and risk function arguments
#148
joshwlambert
closed
1 week ago
0
set risks to `NA` if processes not desired
#146
sbfnk
opened
1 week ago
8
`NA` vs `NULL` for non-used processes
#147
sbfnk
closed
1 week ago
1
documentation for passing anonymous functions not clear
#145
sbfnk
opened
1 week ago
0
Do not error when `hosp_death_risk` is `NA` without hospitalisation
#144
joshwlambert
closed
1 week ago
0
Rename `infect_period` and `prob_infect` to `infectious_period` and `prob_infection`
#143
joshwlambert
closed
2 weeks ago
0
Error when negative infectious period is sampled
#142
joshwlambert
closed
2 weeks ago
0
Issue when using infectious period which can sample negative values
#141
joshwlambert
closed
2 weeks ago
1
Update `CITATION.cff`
#140
github-actions[bot]
closed
2 weeks ago
0
about the relationship between contact distribution, probability of infection, and basic reproduction number
#139
avallecam
opened
3 weeks ago
1
differenciate infectious and infected in arguments `infect_period` and `prob_infect`
#138
avallecam
closed
2 weeks ago
1
Increment to development version
#137
joshwlambert
closed
2 weeks ago
0
Update `CITATION.cff`
#136
github-actions[bot]
closed
1 month ago
0
Increment minor version for v0.3.0 release
#135
joshwlambert
closed
1 month ago
0
Add Key features and Complimentary R packages sections to `README`
#134
joshwlambert
closed
1 month ago
0
Turn partial argument matching check to `TRUE`
#133
joshwlambert
closed
1 month ago
0
Release simulist 0.3.0
#132
joshwlambert
closed
1 month ago
2
Update `CITATION.cff`
#131
github-actions[bot]
closed
1 month ago
0
Ensure `<Date>` in `CITATION`
#130
joshwlambert
closed
1 month ago
0
Capitalise messages returned to user
#129
joshwlambert
closed
1 month ago
0
Improve regex pattern in `.check_age_df()`
#128
joshwlambert
closed
1 month ago
0
Package structure
#127
Karim-Mane
opened
1 month ago
5
Update documentation for `.add_cols` functions
#126
joshwlambert
closed
1 month ago
0
Vectorise `.add_hospitalisation()`?
#125
joshwlambert
closed
1 day ago
0
Update `CITATION.cff`
#124
github-actions[bot]
closed
1 month ago
0
Update `LICENSE` copyright year
#123
joshwlambert
closed
1 month ago
0
Update `sim_linelist()` and `sim_outbreak()` snapshots
#122
joshwlambert
closed
1 month ago
0
Update `DESCRIPTION`
#121
joshwlambert
closed
1 month ago
0
Defaults for all arguments in exported functions
#120
joshwlambert
opened
1 month ago
4
Incorporate under-reporting of cases and contacts
#119
joshwlambert
opened
1 month ago
1
Update `CITATION.cff`
#118
github-actions[bot]
closed
1 month ago
1
{simulist} v0.3.0 full package review
#117
joshwlambert
closed
1 month ago
4
Miscellaneous updates for v0.3.0 release
#116
joshwlambert
closed
1 month ago
0
Reduce image size of package architecture diagram
#115
joshwlambert
closed
1 month ago
0
Update `NEWS.md` for v0.3.0 release
#114
joshwlambert
closed
1 month ago
0
Update package architecture diagram
#113
joshwlambert
closed
1 month ago
0
Use `*_idx` and `*_lgl_idx` naming convention
#112
joshwlambert
closed
1 month ago
0
Replace `is_na()` with `rlang::is_lgl_na()`
#111
joshwlambert
closed
1 month ago
0
Add related projects section to `README`
#110
joshwlambert
closed
1 month ago
1
Should initial value of `num_cases` be 1 in `.sim_internal()`?
#109
jamesmbaazam
closed
2 months ago
3
Add `CODECOV_TOKEN` to `test-coverage.yaml`
#108
joshwlambert
closed
2 months ago
0
can we use `as.function()` to convert object to the `generate()` instead of `density()`?
#107
avallecam
closed
2 months ago
6
Add anonymous line lists
#106
joshwlambert
closed
2 months ago
0
Quick start example throwing error
#105
chartgerink
closed
2 months ago
5
Remove `add_ct` argument
#104
joshwlambert
closed
2 months ago
0
Search interval for maximum mortality risk
#103
pratikunterwegs
closed
2 months ago
1
how to increase the amount of deaths within hospitalized cases? (not urgent)
#102
avallecam
closed
2 months ago
2
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