epiverse-trace simulist issues

epiverse-trace / simulist

An R package for simulating line lists

https://epiverse-trace.github.io/simulist/

Other

5 stars 1 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Full package review for v0.4.0 release

#164 joshwlambert opened 3 weeks ago
1
Update `NEWS.md` for v0.4.0 release

#163 joshwlambert closed 3 weeks ago
0
Update `CITATION.cff`

#162 github-actions[bot] closed 3 weeks ago
0
Package infrastructure updates for v0.4.0 release

#161 joshwlambert closed 3 weeks ago
0
Style code

#160 joshwlambert closed 3 weeks ago
0
Update {epiparameter} usage

#159 joshwlambert closed 3 weeks ago
0
Fix bug with constant Ct value

#158 joshwlambert closed 1 month ago
1
ct distribution parameters by default are not reflected in simulated linelist

#157 avallecam closed 1 month ago
1
Update {epiparameter} usage

#156 joshwlambert closed 2 months ago
0
Fix typo in linter name

#155 Bisaloo closed 3 months ago
0
Update `CITATION.cff`

#154 github-actions[bot] closed 3 months ago
0
Updates to work with {pkgdown} >= 2.1.0

#153 joshwlambert closed 3 months ago
1
Allow for reporting delays in line list simulation

#152 joshwlambert opened 3 months ago
1
add reference paper for the reproduction number calculation

#151 avallecam closed 2 months ago
14
Vectorise `.add_hospitalisation()`

#150 joshwlambert closed 4 months ago
0
Add defaults to all exported function arguments

#149 joshwlambert closed 3 months ago
1
Use `NULL` for onset-to-event and risk function arguments

#148 joshwlambert closed 4 months ago
0
set risks to `NA` if processes not desired

#146 sbfnk closed 3 months ago
8
`NA` vs `NULL` for non-used processes

#147 sbfnk closed 4 months ago
1
documentation for passing anonymous functions not clear

#145 sbfnk closed 3 months ago
0
Do not error when `hosp_death_risk` is `NA` without hospitalisation

#144 joshwlambert closed 4 months ago
0
Rename `infect_period` and `prob_infect` to `infectious_period` and `prob_infection`

#143 joshwlambert closed 4 months ago
0
Error when negative infectious period is sampled

#142 joshwlambert closed 4 months ago
0
Issue when using infectious period which can sample negative values

#141 joshwlambert closed 4 months ago
1
Update `CITATION.cff`

#140 github-actions[bot] closed 4 months ago
0
about the relationship between contact distribution, probability of infection, and basic reproduction number

#139 avallecam closed 2 months ago
2
differenciate infectious and infected in arguments `infect_period` and `prob_infect`

#138 avallecam closed 4 months ago
1
Increment to development version

#137 joshwlambert closed 4 months ago
0
Update `CITATION.cff`

#136 github-actions[bot] closed 5 months ago
0
Increment minor version for v0.3.0 release

#135 joshwlambert closed 5 months ago
0
Add Key features and Complimentary R packages sections to `README`

#134 joshwlambert closed 5 months ago
0
Turn partial argument matching check to `TRUE`

#133 joshwlambert closed 5 months ago
0
Release simulist 0.3.0

#132 joshwlambert closed 5 months ago
2
Update `CITATION.cff`

#131 github-actions[bot] closed 5 months ago
0
Ensure `<Date>` in `CITATION`

#130 joshwlambert closed 5 months ago
0
Capitalise messages returned to user

#129 joshwlambert closed 5 months ago
0
Improve regex pattern in `.check_age_df()`

#128 joshwlambert closed 5 months ago
0
Package structure

#127 Karim-Mane opened 5 months ago
5
Update documentation for `.add_cols` functions

#126 joshwlambert closed 5 months ago
0
Vectorise `.add_hospitalisation()`?

#125 joshwlambert closed 4 months ago
0
Update `CITATION.cff`

#124 github-actions[bot] closed 5 months ago
0
Update `LICENSE` copyright year

#123 joshwlambert closed 5 months ago
0
Update `sim_linelist()` and `sim_outbreak()` snapshots

#122 joshwlambert closed 5 months ago
0
Update `DESCRIPTION`

#121 joshwlambert closed 5 months ago
0
Defaults for all arguments in exported functions

#120 joshwlambert closed 3 months ago
5
Incorporate under-reporting of cases and contacts

#119 joshwlambert opened 5 months ago
1
Update `CITATION.cff`

#118 github-actions[bot] closed 5 months ago
1
{simulist} v0.3.0 full package review

#117 joshwlambert closed 5 months ago
4
Miscellaneous updates for v0.3.0 release

#116 joshwlambert closed 5 months ago
0
Reduce image size of package architecture diagram

#115 joshwlambert closed 5 months ago
0