epiverse-trace / tutorials-middle

https://epiverse-trace.github.io/tutorials-middle/
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update packages to latest versions 2024 #141

Closed avallecam closed 1 week ago

github-actions[bot] commented 1 week ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/epiverse-trace/tutorials-middle/compare/md-outputs..md-outputs-PR-141

The following changes were observed in the rendered markdown documents:

 create-forecast.md                                 | 106 +++------
 data/covid_360days.rds (new)                       | Bin 0 -> 12023 bytes
 delays-access.md                                   | 198 +++++++++-------
 delays-functions.md                                |  87 +++----
 ...create-forecast-rendered-unnamed-chunk-10-1.png | Bin 9606 -> 9588 bytes
 ...create-forecast-rendered-unnamed-chunk-12-1.png | Bin 5674 -> 8635 bytes
 ...forecast-rendered-unnamed-chunk-13-1.png (gone) | Bin 8760 -> 0 bytes
 fig/create-forecast-rendered-unnamed-chunk-4-1.png | Bin 48953 -> 49159 bytes
 ...elays-functions-rendered-unnamed-chunk-16-1.png | Bin 50811 -> 50806 bytes
 ...elays-functions-rendered-unnamed-chunk-17-1.png | Bin 52553 -> 52047 bytes
 ...elays-functions-rendered-unnamed-chunk-20-1.png | Bin 49547 -> 50466 bytes
 ...elays-functions-rendered-unnamed-chunk-21-1.png | Bin 30714 -> 33460 bytes
 ....png => quantify-transmissibility-regional.png} | Bin
 ...ssibility-rendered-unnamed-chunk-10-1.png (new) | Bin 0 -> 69250 bytes
 ...sibility-rendered-unnamed-chunk-11-1.png (gone) | Bin 7102 -> 0 bytes
 ...ssibility-rendered-unnamed-chunk-18-1.png (new) | Bin 0 -> 29998 bytes
 ...ransmissibility-rendered-unnamed-chunk-19-1.png | Bin 30454 -> 30371 bytes
 ...sibility-rendered-unnamed-chunk-20-1.png (gone) | Bin 30622 -> 0 bytes
 ...transmissibility-rendered-unnamed-chunk-9-1.png | Bin 9810 -> 9543 bytes
 ...y-static-rendered-unnamed-chunk-19-1.png (gone) | Bin 29023 -> 0 bytes
 ...ty-static-rendered-unnamed-chunk-20-1.png (new) | Bin 0 -> 24187 bytes
 ...reading-estimate-rendered-unnamed-chunk-4-1.png | Bin 6139555 -> 6447234 bytes
 md5sum.txt                                         |  34 +--
 network.html                                       |   6 +-
 quantify-transmissibility.md                       | 245 +++++++-------------
 severity-static.md                                 | 251 +++++++++------------
 superspreading-estimate.md                         |  16 +-
 superspreading-simulate.md                         |  58 ++---
 webshot.png                                        | Bin 6139555 -> 6447234 bytes
 29 files changed, 442 insertions(+), 559 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2024-11-21 16:30:16 +0000