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epruesse / SINA

SINA - Reference based multiple sequence alignment
https://sina.readthedocs.io
GNU General Public License v3.0
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Align reduces family if --realign #64

Open epruesse opened 5 years ago

epruesse commented 5 years ago

Realign requires that no reference sequences containing the query be used. This is checked in align right now, which means that the reference set gets smaller. It should be done in famfinder - probably actually as "leave-query-out".