fastlmm / FaST-LMM

Python version of Factored Spectrally Transformed Linear Mixed Models
https://fastlmm.github.io/
Apache License 2.0
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fastlmm doesn't work with newest version of pip #13

Closed CarlKCarlK closed 3 years ago

CarlKCarlK commented 3 years ago

If you try to install with the instructions in the old README and then use FaST-LMM, you'll get an error like:

ValueError: numpy.ndarray size changed, may indicate binary incompatibility. Expected 88 from C header, got 80 from PyObject

There is a fix. Install like this:

conda install "mkl==2019.4" "scipy" "numpy"
pip install --no-build-isolation fastlmm