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fgcz / rawrr

Access Orbitrap data in R lang using C# mono assembly - bioconductor package
https://bioconductor.org/packages/rawrr/
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fast mass-spectrometry multiplatform orbitrap-ms rpackage

readme

Project Status: Active – The project has reached a stable, usable state and is being actively developed. JPR codecov bioc-check Downloads

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rawrr

The package provides access to proprietary Thermo Fisher Scientific Orbitrap instrument data as a stand-alone R package or serves as MsRawFileReaderBackend for the Bioconductor Spectra package. rawrr wraps the functionality of the RawFileReader .NET assembly. Test files are provided by the tartare ExperimentData package.

Install

Please follow the INSTALL instructions provided through

https://bioconductor.org/packages/rawrr/

The latest source package build bioconductor devel branch can be found through

https://fgcz-ms.uzh.ch/~cpanse/rawrr/

Manuscript

http://dx.doi.org/10.1021/acs.jproteome.0c00866

Talks