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fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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[auto] Update dependencies in `poetry.lock` #809

Closed tcompa closed 3 months ago

tcompa commented 4 months ago

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 5 updates, 0 removals

  - Updating pyyaml (6.0.1 -> 6.0.2)
  - Updating zipp (3.19.2 -> 3.20.0)
  - Updating importlib-metadata (8.0.0 -> 8.3.0)
  - Updating dask (2024.7.0 -> 2024.8.0)
  - Updating array-api-compat (1.7.1 -> 1.8)

Writing lock file

Outdated dependencies before PR:

alabaster                     (!) 0.7.16              1.0.0              
app-model                     (!) 0.2.7               0.2.8              
array-api-compat                  1.7.1               1.8                
astropy                       (!) 6.0.1               6.1.2              
astropy-iers-data             (!) 0.2024.7.15.0.31.42 0.2024.8.19.0.32.16
attrs                         (!) 23.2.0              24.2.0             
babel                         (!) 2.15.0              2.16.0             
cellpose                      (!) 2.2.3               3.0.10             
cffi                          (!) 1.16.0              1.17.0             
cmake                         (!) 3.30.0              3.30.2             
dask                              2024.7.0            2024.8.1           
debugpy                       (!) 1.8.2               1.8.5              
docstring-parser                  0.15                0.16               
executing                     (!) 0.10.0              2.0.1              
fastremap                     (!) 1.14.2              1.15.0             
filelock                          3.13.4              3.15.4             
imageio                       (!) 2.34.2              2.35.1             
imageio-ffmpeg                (!) 0.4.9               0.5.1              
importlib-metadata                8.0.0               8.3.0              
ipython                       (!) 8.18.1              8.26.0             
jupyterlab                    (!) 4.2.3               4.2.4              
jupyterlab-server             (!) 2.27.2              2.27.3             
jupytext                      (!) 1.16.3              1.16.4             
lxml                              4.9.4               5.3.0              
magicgui                      (!) 0.8.3               0.9.1              
matplotlib                    (!) 3.9.1               3.9.2              
napari                        (!) 0.5.0               0.5.2              
napari-skimage-regionprops    (!) 0.8.2               0.10.1             
napari-workflows              (!) 0.2.10              0.2.11             
networkx                      (!) 3.2.1               3.3                
npe2                          (!) 0.7.6               0.7.7              
numcodecs                         0.12.1              0.13.0             
numpy                             1.26.4              2.1.0              
numpydoc                      (!) 1.7.0               1.8.0              
nvidia-cublas-cu11            (!) 11.10.3.66          11.11.3.6          
nvidia-cuda-cupti-cu11        (!) 11.7.101            11.8.87            
nvidia-cuda-nvrtc-cu11        (!) 11.7.99             11.8.89            
nvidia-cuda-runtime-cu11      (!) 11.7.99             11.8.89            
nvidia-cudnn-cu11             (!) 8.5.0.96            9.3.0.75           
nvidia-curand-cu11            (!) 10.2.10.91          10.3.0.86          
nvidia-cusolver-cu11          (!) 11.4.0.1            11.4.1.48          
nvidia-cusparse-cu11          (!) 11.7.4.91           11.7.5.86          
nvidia-nccl-cu11              (!) 2.14.3              2.21.5             
nvidia-nvtx-cu11              (!) 11.7.91             11.8.86            
pandas                            1.5.3               2.2.2              
pooch                         (!) 1.8.0               1.8.2              
pure-eval                     (!) 0.2.2               0.2.3              
pycodestyle                   (!) 2.12.0              2.12.1             
pydantic-core                     2.20.1              2.23.0             
pytest                        (!) 7.4.4               8.3.2              
pyyaml                            6.0.1               6.0.2              
pyzmq                         (!) 26.0.3              26.1.1             
rpds-py                       (!) 0.19.0              0.20.0             
scipy                             1.13.1              1.14.0             
setuptools                        70.3.0              73.0.0             
soupsieve                     (!) 2.5                 2.6                
sphinx                        (!) 7.4.4               8.0.2              
sphinxcontrib-applehelp       (!) 1.0.8               2.0.0              
sphinxcontrib-devhelp         (!) 1.0.6               2.0.0              
sphinxcontrib-htmlhelp        (!) 2.0.5               2.1.0              
sphinxcontrib-qthelp          (!) 1.0.7               2.0.0              
sphinxcontrib-serializinghtml (!) 1.1.10              2.0.0              
stack-data                    (!) 0.5.1               0.6.3              
stackview                     (!) 0.8.0               0.8.2              
sympy                         (!) 1.13.0              1.13.2             
tifffile                      (!) 2024.7.2            2024.8.10          
torch                         (!) 2.0.0               2.4.0              
tqdm                          (!) 4.66.4              4.66.5             
triton                        (!) 2.0.0               3.0.0              
typer                         (!) 0.12.3              0.12.4             
webcolors                     (!) 24.6.0              24.8.0             
wheel                         (!) 0.43.0              0.44.0             
zipp                              3.19.2              3.20.0

Outdated dependencies after PR:

alabaster                  (!) 0.7.16     1.0.0     A light, configurable Sp...
astropy                    (!) 6.0.1      6.1.2     Astronomy and astrophysi...
cellpose                   (!) 2.2.3      3.0.10    anatomical segmentation ...
dask                           2024.8.0   2024.8.1  Parallel PyData with Tas...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.15.4    A platform independent f...
imageio-ffmpeg             (!) 0.4.9      0.5.1     FFMPEG wrapper for Python
ipython                    (!) 8.18.1     8.26.0    IPython: Productive Inte...
lxml                           4.9.4      5.3.0     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
numcodecs                      0.12.1     0.13.0    A Python package providi...
numpy                          1.26.4     2.1.0     Fundamental package for ...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.3.0.75  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.2     "Pooch manages your Pyth...
pydantic-core                  2.20.1     2.23.0    Core functionality for P...
pytest                     (!) 7.4.4      8.3.2     pytest: simple powerful ...
scipy                          1.13.1     1.14.0    Fundamental algorithms f...
sphinx                     (!) 7.4.7      8.0.2     Python documentation gen...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.4.0     Tensors and Dynamic neur...
triton                     (!) 2.0.0      3.0.0     A language and compiler ...

Note: there may be dependencies in the table above which were not updated as part of this PR. The reason is they require manual updating due to the way they are pinned.

github-actions[bot] commented 4 months ago

Coverage report

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