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galaxyproject
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ephemeris
Library for managing Galaxy plugins - tools, index data, and workflows.
https://ephemeris.readthedocs.org/
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Adding pysam to requirements
#168
cat-bro
opened
3 years ago
2
Bring in usegalaxy-tools script for updating lock files.
#167
jmchilton
opened
3 years ago
0
Lots of file descriptors open while testing installed tools
#166
HugoJH
opened
3 years ago
6
Various updates to testing and CI infrastructure.
#165
jmchilton
closed
3 years ago
2
Allow using client_test_config with shed_tools test.
#164
jmchilton
closed
3 years ago
1
Close files
#163
almahmoud
closed
3 years ago
2
usegalaxy.* shared data updater creates duplicates
#162
hexylena
opened
3 years ago
4
Handle terminal states in wait for install
#161
mvdbeek
closed
3 years ago
0
Prepare 0.10.6 release
#160
mvdbeek
closed
4 years ago
0
get all tools when searching for tool ids for testing (get_tools instead of get_tool_panel)
#159
cat-bro
closed
4 years ago
4
Wait for the correct repository
#158
mvdbeek
closed
4 years ago
1
run-datamanagers issue
#157
anfie
closed
4 years ago
2
Fix `shed-tools test -t workflow_tools.yml`
#155
nsoranzo
closed
4 years ago
0
Fix installing tool dependencies from yaml list
#154
mvdbeek
closed
4 years ago
2
wait_for_install is too strict
#153
mvdbeek
closed
4 years ago
0
setup data lib: improve jobs watching in legacy mode
#152
abretaud
opened
4 years ago
0
run-data-managers - need help
#151
lecorguille
opened
4 years ago
2
Cast exceptions to string using unicodify
#150
mvdbeek
closed
4 years ago
0
Add description when creating folders with setup_data_libraries
#149
abretaud
closed
4 years ago
3
UnicodeEncodeError: 'ascii' codec can't encode characters in position 4576-4577: ordinal not in range(128)
#148
bgruening
closed
4 years ago
1
Prepare 0.10.4 release
#147
mvdbeek
closed
4 years ago
0
When polling for repo install status, ensure the correct revision is being checked
#146
natefoo
closed
4 years ago
2
Fix typo and add entry point
#145
innovate-invent
closed
4 years ago
2
Prep 0.10.3 release
#144
mvdbeek
closed
4 years ago
0
Require galaxy-tool-util instead of galaxy-lib
#143
nsoranzo
closed
4 years ago
3
Release to PyPI on tag
#142
mvdbeek
closed
4 years ago
1
Proper and fast check if repos are installed.
#141
rhpvorderman
closed
4 years ago
12
Workaround needed: Repos that were updated without a version bump are not installable to the new revision
#140
rhpvorderman
closed
4 years ago
4
Data library creation would hang forever if you had a single non-ok command ever
#138
hexylena
closed
4 years ago
2
Don't raise exception when tool tests can't be fetched
#137
mvdbeek
closed
5 years ago
0
Print exception when unexpected test failure is caught
#136
mvdbeek
closed
5 years ago
0
Fix default message check
#135
mvdbeek
closed
5 years ago
1
Intercept requests.exceptions.ConnectionError in addition to bioblend…
#134
mvdbeek
closed
5 years ago
0
Tool installation unknown tool is unnecesarily fatal
#133
hexylena
closed
4 years ago
3
Prepare 0.10.0
#132
mvdbeek
closed
5 years ago
0
Conda package version behind pip
#131
innovate-invent
closed
5 years ago
1
Add tool_deps tool to allow triggering installation of local tool dep…
#130
innovate-invent
closed
4 years ago
5
fix doc building and regenerate
#129
martenson
closed
5 years ago
1
Add pysam and continue if test fetching errors
#128
mvdbeek
closed
3 years ago
10
fix default for 'parallel_tests' typo
#127
martenson
closed
5 years ago
0
Include some additional stats for xunit reporting
#126
mvdbeek
closed
5 years ago
0
Testing tools as a non-default user
#125
monprin
opened
5 years ago
1
shed_tools install fails with `KeyError: 'tool_shed_url'`
#124
pcm32
closed
5 years ago
0
Handle timeout gracefully for UWSGI connection
#123
pcm32
closed
5 years ago
2
Update Docs for User Name (Should be Email)
#122
rdvelazquez
closed
5 years ago
1
remove the python invocation from usage examples
#121
martenson
closed
5 years ago
1
Fix crash when too_with_panel is empty
#120
jvanbraekel
closed
5 years ago
0
Fix crash when tool_with_panel is empty
#119
jvanbraekel
closed
5 years ago
2
Test tools in parallel, with regular user permissions, without a shared filesystem
#118
mvdbeek
closed
5 years ago
4
Tool testing improvements
#117
mvdbeek
opened
5 years ago
3
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