Confusion about predicted cell type with my own reference

gao-lab / Cell_BLAST

A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.

http://cblast.gao-lab.org

MIT License

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Confusion about predicted cell type with my own reference #31

Closed IvyYang00 closed 4 months ago

IvyYang00 commented 4 months ago

Hi CellBLAST team!

I'm using CellBlast to build my own reference and train models. But I got many predicted cell types as "rejected" when querying test dataset. But I can querying well when I use another dataset to build reference. What might be the cause?