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geneontology / go-annotation

This repository hosts the tracker for issues pertaining to GO annotations.
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TreeGrafter issue, many not Cytosolic ribosomal large subunit #5062

Open ValWood opened 6 months ago

ValWood commented 6 months ago

These are all MITOCHONDRIAL large subunit

Img1 IEA with PTHR33343:SF1 mrp11 IEA with PTHR11560:SF8 GO_REF:0000118 mrp7 IEA with PTHR15893:SF0 GO_REF:0000118 mrpl1 IEA with PTHR36427:SF3 GO_REF:0000118 mrpl12 IEA with PTHR45987:SF4 GO_REF:0000118 mrpl16 IEA with PTHR12220:SF13 GO_REF:0000118 mrpl23 IEA with PTHR11545:SF2 GO_REF:0000118 mrpl24 IEA with PTHR13528:SF2 GO_REF:0000118 mrpl33 IEA with PTHR15892:SF2 GO_REF:0000118 mrpl38 IEA with PTHR11761:SF3 GO_REF:0000118 mrpl39 IEA with PTHR15238:SF1 GO_REF:0000118 mrpl7 IEA with PTHR11994:SF4 GO_REF:0000118 mrpl8 IEA with PTHR14413:SF16 GO_REF:0000118 mrpl9 IEA with PTHR11229:SF8 GO_REF:0000118 new15 IEA with PTHR33343:SF1

(not these propagations probably come from bacteria)

ValWood commented 6 months ago

Also this one, but is more complicated

Rlp7 GO:0022625 cytosolic large ribosomal subunit IBA with MGI:98073 , PTN000897517 , 735169 , P18124 , S000003044 , S000006119 GO_REF:0000033 104

Rlp7 is a (conserved) ribosomal L7/Ul30-like protein, but it is only involved in ribosome biogenesis, it isn't part of the final ribosome