Review annotations to GO:0008272 sulfate transport

[raymond91125]

Dear all,

The proposal has been made to obsolete GO:0008272 sulfate transport see https://github.com/geneontology/go-ontology/issues/28653. Replaced by GO:1902358 sulfate transmembrane transport

Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/1nnZ1_bJHGVu_X5uU-0qQPA-R7Ha-R-STYChPMPqiQGc/edit?gid=0#gid=0

Impacted groups: AspGD 3 (automatic transfer) EcoCyc 2 FlyBase 3 (automatic transfer) MGI 2 (automatic transfer) MTBBASE 1 (automatic transfer) PINC 2 (automatic transfer) RGD 4 Reactome 2 SGD 4 (automatic transfer) SGN 2 @lukasmueller (not on GH) TAIR 7 UniProt 17 (automatic transfer) ZFIN 2 (automatic transfer)

** Group contacts: https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv

Mappings that need to be reviewed: (InterPro2GO, UniProt-Keywords, UniRule) (not sure whom to notify) UniProtKB-KW:KW-0764 Sulfate transport > GO:sulfate transport ; GO:0008272 InterPro:IPR005666 Sulphate transport system permease protein 1 > GO:sulfate transport ; GO:0008272 InterPro:IPR005667 Sulphate ABC transporter permease protein 2 > GO:sulfate transport ; GO:0008272 InterPro:IPR011865 Sulphate ABC transporter, permease protein CysT > GO:sulfate transport ; GO:0008272 InterPro:IPR018045 Sulphate anion transporter, conserved site > GO:sulfate transport ; GO:0008272

Thanks.

[amandamackie]

EcoCyc done

[sarach06]

Thank you very much for this. I have replaced the GO term in the InterPro entries mentioned above. These changes will be available in the next InterPro release (102.0).

Best regards, Sara

[deustp01]

Reactome is done (but can only find one use of the obsolete term).

[tberardini]

TAIR done, annotations automatically moved to replacement term.