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This repository hosts the tracker for issues pertaining to GO annotations.
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Review annotations to GO:0044255 cellular lipid metabolic process GO:0097384 cellular lipid biosynthetic process GO:0044242 cellular lipid catabolic process #5457

Open edwong57 opened 1 week ago

edwong57 commented 1 week ago

Dear all,

The proposal has been made to obsolete GO:0044255 cellular lipid metabolic process GO:0097384 cellular lipid biosynthetic process GO:0044242 cellular lipid catabolic process

see https://github.com/geneontology/go-ontology/issues/28975

Experimental annotations that need to be reviewed are here: https://docs.google.com/spreadsheets/d/1HgBsIns63fgyWwsr-NIO8ISLIETtQRW18RrB1Cs7pbs/edit?usp=sharing

Impacted groups: GO:0044255 cellular lipid metabolic process - 46 EXP 18 MGI 11 SGD 10 UniProt 3 WB 2 FlyBase 1 PseudoCAP 1 ZFIN

GO:0097384 cellular lipid biosynthetic process - 2 EXP 2 MGI

GO:0044242 cellular lipid catabolic process - 9 EXP 4 MGI 1 AgBase 1 BHF-UCL 1 RGD 1 SGD 1 UniProt

Mappings that need to be reviewed: (InterPro2GO, UniProt-Keywords, UniRule)

Thanks.

edwong57 commented 1 week ago

SGD is done

RLovering commented 1 week ago

UCL done

pgaudet commented 1 week ago

Since there will be an automatic replacement, most groups listed here don't need to update the annotations (although they are very general!)

I remove everyone but PseudoCap.

edwong57 commented 1 week ago

Thanks, Pascale! I didn’t realize there was going to be an automatic replacement.

Edith

From: pgaudet @.> Date: Monday, September 23, 2024 at 2:29 AM To: geneontology/go-annotation @.> Cc: Edith Wong @.>, Assign @.> Subject: Re: [geneontology/go-annotation] Review annotations to GO:0044255 cellular lipid metabolic process GO:0097384 cellular lipid biosynthetic process GO:0044242 cellular lipid catabolic process (Issue #5457)

Since there will be an automatic replacement, most groups listed here don't need to update the annotations (although they are very general!)

I remove everyone but PseudoCap.

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