The proposal has been made to obsolete:
GO term ID and Label
GO:0044237 cellular metabolic process
GO:0046950 cellular ketone body metabolic process
GO:0046379 extracellular polysaccharide metabolic process
GO:0031323 regulation of cellular metabolic process
GO:0006521 regulation of cellular amino acid metabolic process
GO:0031324 neg regulation of cellular metabolic process
GO:0031325 pos regulation of cellular metabolic process
The reason for obsoletion is that these terms are now redundant terms to:
GO:0008152 metabolic proces
GO:1902224 ketone body metabolic process
GO:0005976 polysaccharide metabolic process
GO:0019222 regulation of metabolic process
GO:0006521 regulation of amino acid metabolic process
GO:0009892 neg reg of metabolic process
GO:0009893 pos reg of metabolic process
Annotations:
There are 63 experimental annotations to this term by (list of impacted groups and their respective numbers of EXP and ISS annotations).
1 BHF-UCL
1 SGD
1 CGD
1 PseudoCAP
1 TAIR
52 MGI
1 RGD
4 UniProt
There are 7 InterPro2GO/UniRule/UniProtKW mappings to this term.
GO:0046950 cellular ketone body metabolic process - in goslim_pir
These terms are being replaced with corresponding terms without 'cellular' in the name:
GO:0008152 metabolic proces
GO:1902224 ketone body metabolic process
GO:0005976 polysaccharide metabolic process
GO:0019222 regulation of metabolic process
GO:0006521 regulation of amino acid metabolic process
GO:0009892 neg reg of metabolic process
GO:0009893 pos reg of metabolic process
Dear all,
The proposal has been made to obsolete: GO term ID and Label GO:0044237 cellular metabolic process GO:0046950 cellular ketone body metabolic process GO:0046379 extracellular polysaccharide metabolic process GO:0031323 regulation of cellular metabolic process GO:0006521 regulation of cellular amino acid metabolic process GO:0031324 neg regulation of cellular metabolic process GO:0031325 pos regulation of cellular metabolic process
The reason for obsoletion is that these terms are now redundant terms to:
GO:0008152 metabolic proces GO:1902224 ketone body metabolic process GO:0005976 polysaccharide metabolic process GO:0019222 regulation of metabolic process GO:0006521 regulation of amino acid metabolic process GO:0009892 neg reg of metabolic process GO:0009893 pos reg of metabolic process
Related to clean up of cellular process terms - https://github.com/geneontology/go-ontology/issues/28908
Annotations: There are 63 experimental annotations to this term by (list of impacted groups and their respective numbers of EXP and ISS annotations). 1 BHF-UCL 1 SGD 1 CGD 1 PseudoCAP 1 TAIR 52 MGI 1 RGD 4 UniProt
There are 7 InterPro2GO/UniRule/UniProtKW mappings to this term.
GO:0046950 cellular ketone body metabolic process - in goslim_pir
Annotations can be viewed here: https://github.com/geneontology/go-annotation/issues/5470.
These terms are being replaced with corresponding terms without 'cellular' in the name: GO:0008152 metabolic proces GO:1902224 ketone body metabolic process GO:0005976 polysaccharide metabolic process GO:0019222 regulation of metabolic process GO:0006521 regulation of amino acid metabolic process GO:0009892 neg reg of metabolic process GO:0009893 pos reg of metabolic process
Any comments can be added to the issue: https://github.com/geneontology/go-ontology/issues/29021. Unless objections are received by Oct 14, 2024, we will assume that you agree to this change.
Thanks,
The GO-Ontology Editors