The ./bin folder is designed to hold small, self-contained executable scripts used by the Nextflow processes, ideally below 1MB. The nf-gwas workflow contains a 22MB jar file, which does not seem to be called directly in the pipeline.
Is this jar file still necessary for the workflow? If not, I would recommend that it be removed. If the jar file is required by one of the executables contained in the docker image, it would make sense that tabix-merge.jar is also included in the docker image.
The ./bin folder is designed to hold small, self-contained executable scripts used by the Nextflow processes, ideally below 1MB. The nf-gwas workflow contains a 22MB jar file, which does not seem to be called directly in the pipeline.
Is this jar file still necessary for the workflow? If not, I would recommend that it be removed. If the jar file is required by one of the executables contained in the docker image, it would make sense that tabix-merge.jar is also included in the docker image.