Document the pipeline - Githubissues

genomic-medicine-sweden / tomte

A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient

MIT License

12 stars 3 forks source link

Document the pipeline #41

Closed jemten closed 1 year ago

jemten commented 1 year ago

The pipeline lacks some basic documentation describing the processes included together with which outfiles that are produced by the pipeline. To be added:

Drop AberrantExpression
Drop AberrantSplicing
Variantcalling and mono allelic expression