search

gerlichlab / looptrace

Fork (from EMBL Gitlab) of the looptrace project: https://git.embl.de/grp-ellenberg/looptrace
Apache License 2.0
2 stars 1 forks source link

Regional spot count plotting is attempted before filtering spots for nuclei inclusion #296

Closed vreuter closed 8 months ago

vreuter commented 8 months ago

This is problematic because the plotting attempts count spots before and after filtration for nuclei inclusion, so it needs the filtration-for-inclusion-in-nuclei step to have already been completed.

vreuter commented 8 months ago

Closed by https://github.com/vreuter/looptrace/commit/34bab86d69017ee0a42cc1dd3b76e8173644e268