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Python AI assistant 🧠
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Compilation error #86

Closed ocamposbio closed 3 years ago

ocamposbio commented 3 years ago

Please help me LOG ERROR:

Building wheels for collected packages: lxml, PyAudio, scikit-learn Building wheel for lxml (setup.py) ... error ERROR: Command errored out with exit status 1: command: /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-gtjjp10k/lxml_637439183f7e42128567fd120ee54db2/setup.py'"'"'; file='"'"'/tmp/pip-install-gtjjp10k/lxml_637439183f7e42128567fd120ee54db2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-urcft4qx cwd: /tmp/pip-install-gtjjp10k/lxml_637439183f7e42128567fd120ee54db2/ Complete output (96 lines): Building lxml version 4.3.4. Building without Cython. ERROR: b'/bin/sh: 1: xslt-config: not found\n' make sure the development packages of libxml2 and libxslt are installed

Using build configuration of libxslt running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-3.8 creating build/lib.linux-x86_64-3.8/lxml copying src/lxml/_elementpath.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/builder.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/init.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/usedoctest.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/cssselect.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/doctestcompare.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/pyclasslookup.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/sax.py -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/ElementInclude.py -> build/lib.linux-x86_64-3.8/lxml creating build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/init.py -> build/lib.linux-x86_64-3.8/lxml/includes creating build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/_diffcommand.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/_setmixin.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/builder.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/init.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/diff.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/usedoctest.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/_html5builder.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/formfill.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/html5parser.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/soupparser.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/clean.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/ElementSoup.py -> build/lib.linux-x86_64-3.8/lxml/html copying src/lxml/html/defs.py -> build/lib.linux-x86_64-3.8/lxml/html creating build/lib.linux-x86_64-3.8/lxml/isoschematron copying src/lxml/isoschematron/init.py -> build/lib.linux-x86_64-3.8/lxml/isoschematron copying src/lxml/etree.h -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/etree_api.h -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/lxml.etree.h -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/lxml.etree_api.h -> build/lib.linux-x86_64-3.8/lxml copying src/lxml/includes/relaxng.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/tree.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xinclude.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xslt.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/schematron.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/init.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/etreepublic.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/uri.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/htmlparser.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xmlschema.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/c14n.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/dtdvalid.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xmlerror.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/config.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xmlparser.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/xpath.pxd -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/lxml-version.h -> build/lib.linux-x86_64-3.8/lxml/includes copying src/lxml/includes/etree_defs.h -> build/lib.linux-x86_64-3.8/lxml/includes creating build/lib.linux-x86_64-3.8/lxml/isoschematron/resources creating build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/rng copying src/lxml/isoschematron/resources/rng/iso-schematron.rng -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/rng creating build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl copying src/lxml/isoschematron/resources/xsl/RNG2Schtrn.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl copying src/lxml/isoschematron/resources/xsl/XSD2Schtrn.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl creating build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_svrl_for_xslt1.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_message.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_abstract_expand.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_skeleton_for_xslt1.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_dsdl_include.xsl -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/readme.txt -> build/lib.linux-x86_64-3.8/lxml/isoschematron/resources/xsl/iso-schematron-xslt1 running build_ext building 'lxml.etree' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/src creating build/temp.linux-x86_64-3.8/src/lxml x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DCYTHON_CLINE_IN_TRACEBACK=0 -Isrc -Isrc/lxml/includes -I/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/include -I/usr/include/python3.8 -c src/lxml/etree.c -o build/temp.linux-x86_64-3.8/src/lxml/etree.o -w In file included from src/lxml/etree.c:692: src/lxml/includes/etree_defs.h:14:10: fatal error: libxml/xmlversion.h: No such file or directory 14 | #include "libxml/xmlversion.h" | ^~~~~ compilation terminated. Compile failed: command 'x86_64-linux-gnu-gcc' failed with exit status 1 creating tmp cc -I/usr/include/libxml2 -c /tmp/xmlXPathInituz5w5_le.c -o tmp/xmlXPathInituz5w5_le.o /tmp/xmlXPathInituz5w5_le.c:1:10: fatal error: libxml/xpath.h: No such file or directory 1 | #include "libxml/xpath.h" | ^~~~ compilation terminated.

Could not find function xmlCheckVersion in library libxml2. Is libxml2 installed?

error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

ERROR: Failed building wheel for lxml Running setup.py clean for lxml Building wheel for PyAudio (setup.py) ... error ERROR: Command errored out with exit status 1: command: /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-gtjjp10k/pyaudio_ec672df5993d4d419f30458a80ab09ac/setup.py'"'"'; file='"'"'/tmp/pip-install-gtjjp10k/pyaudio_ec672df5993d4d419f30458a80ab09ac/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-uh6u3k_w cwd: /tmp/pip-install-gtjjp10k/pyaudio_ec672df5993d4d419f30458a80ab09ac/ Complete output (16 lines): running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-3.8 copying src/pyaudio.py -> build/lib.linux-x86_64-3.8 running build_ext building '_portaudio' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/src x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/include -I/usr/include/python3.8 -c src/_portaudiomodule.c -o build/temp.linux-x86_64-3.8/src/_portaudiomodule.o src/_portaudiomodule.c:29:10: fatal error: portaudio.h: No such file or directory 29 | #include "portaudio.h" | ^~~~~ compilation terminated. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

ERROR: Failed building wheel for PyAudio Running setup.py clean for PyAudio Building wheel for scikit-learn (setup.py) ... error ERROR: Command errored out with exit status 1: command: /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"'; file='"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9sxvwstv cwd: /tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/ Complete output (100 lines): Partial import of sklearn during the build process. blas_opt_info: blas_mkl_info: customize UnixCCompiler libraries mkl_rt not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

blis_info: customize UnixCCompiler libraries blis not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

openblas_info: customize UnixCCompiler customize UnixCCompiler libraries openblas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

atlas_3_10_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler libraries tatlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

atlas_3_10_blas_info: customize UnixCCompiler libraries satlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

atlas_blas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler libraries ptf77blas,ptcblas,atlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

atlas_blas_info: customize UnixCCompiler get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']' customize Gnu95FCompiler Found executable /usr/bin/gfortran customize Gnu95FCompiler customize Gnu95FCompiler using config compiling '_configtest.c':

/ This file is generated from numpy/distutils/system_info.py / void ATL_buildinfo(void); int main(void) { ATL_buildinfo(); return 0; }

C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

compile options: '-c' x86_64-linux-gnu-gcc: _configtest.c x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest customize UnixCCompiler customize UnixCCompiler FOUND: language = c define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)] libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas'] library_dirs = ['/usr/lib/x86_64-linux-gnu']

accelerate_info: NOT AVAILABLE

FOUND:
  language = c
  define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
  libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
  library_dirs = ['/usr/lib/x86_64-linux-gnu']

Traceback (most recent call last): File "", line 1, in File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 290, in setup_package() File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 286, in setup_package setup(*metadata) File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/core.py", line 137, in setup config = configuration() File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 174, in configuration config.add_subpackage('sklearn') File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1034, in add_subpackage config_list = self.get_subpackage(subpackage_name, subpackage_path, File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1000, in get_subpackage config = self._get_configuration_from_setup_py( File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(args) File "sklearn/setup.py", line 66, in configuration config.add_subpackage('utils') File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1034, in add_subpackage config_list = self.get_subpackage(subpackage_name, subpackage_path, File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1000, in get_subpackage config = self._get_configuration_from_setup_py( File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "sklearn/utils/setup.py", line 8, in configuration from Cython import Tempita ModuleNotFoundError: No module named 'Cython'

ERROR: Failed building wheel for scikit-learn Running setup.py clean for scikit-learn Failed to build lxml PyAudio scikit-learn Installing collected packages: scikit-learn, requests, pycairo, nltk, jaraco.itertools, geojson, beautifulsoup4, word2number, wolframalpha, wikipedia, web-cache, textblob, speedtest-cli, SpeechRecognition, sklearn, pyttsx3, pyowm, pymongo, pygobject, PyAudio, PTable, psutil, playsound, patch, mock, lxml, gTTS-token, google, colorize, Click, bs4, APScheduler, appdirs Running setup.py install for scikit-learn ... error ERROR: Command errored out with exit status 1: command: /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"'; file='"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-u7x7205l/install-record.txt --single-version-externally-managed --compile --install-headers /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/include/site/python3.8/scikit-learn cwd: /tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/ Complete output (100 lines): Partial import of sklearn during the build process. blas_opt_info: blas_mkl_info: customize UnixCCompiler libraries mkl_rt not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE

blis_info:
customize UnixCCompiler
  libraries blis not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
  NOT AVAILABLE

openblas_info:
customize UnixCCompiler
customize UnixCCompiler
  libraries openblas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
  NOT AVAILABLE

atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries tatlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
  NOT AVAILABLE

atlas_3_10_blas_info:
customize UnixCCompiler
  libraries satlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
  NOT AVAILABLE

atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
  libraries ptf77blas,ptcblas,atlas not found in ['/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
  NOT AVAILABLE

atlas_blas_info:
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Found executable /usr/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using config
compiling '_configtest.c':

/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
  ATL_buildinfo();
  return 0;
}

C compiler: x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC

compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
customize UnixCCompiler
customize UnixCCompiler
  FOUND:
    language = c
    define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
    libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
    library_dirs = ['/usr/lib/x86_64-linux-gnu']

accelerate_info:
  NOT AVAILABLE

  FOUND:
    language = c
    define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)]
    libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
    library_dirs = ['/usr/lib/x86_64-linux-gnu']

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 290, in <module>
    setup_package()
  File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 286, in setup_package
    setup(**metadata)
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/core.py", line 137, in setup
    config = configuration()
  File "/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py", line 174, in configuration
    config.add_subpackage('sklearn')
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1034, in add_subpackage
    config_list = self.get_subpackage(subpackage_name, subpackage_path,
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1000, in get_subpackage
    config = self._get_configuration_from_setup_py(
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "sklearn/setup.py", line 66, in configuration
    config.add_subpackage('utils')
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1034, in add_subpackage
    config_list = self.get_subpackage(subpackage_name, subpackage_path,
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 1000, in get_subpackage
    config = self._get_configuration_from_setup_py(
  File "/home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/lib/python3.8/site-packages/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py
    config = setup_module.configuration(*args)
  File "sklearn/utils/setup.py", line 8, in configuration
    from Cython import Tempita
ModuleNotFoundError: No module named 'Cython'
----------------------------------------

ERROR: Command errored out with exit status 1: /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/bin/python -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"'; file='"'"'/tmp/pip-install-gtjjp10k/scikit-learn_33b0942a51cf4b699f0fcf9d6799ac7e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-u7x7205l/install-record.txt --single-version-externally-managed --compile --install-headers /home/otavio/Desktop/ProjectJulia/jarvis_virtualenv/include/site/python3.8/scikit-learn Check the logs for full command output. Install Python dependencies failed

ggeop commented 3 years ago

Hi @Otavio-campos-bio! Thanks for your patience, the above issue resolved with commit c6629a27b39cfcaa9349914e3663e7b7f448dbea