search

guanchangge / mosaik-aligner

Automatically exported from code.google.com/p/mosaik-aligner
0 stars 0 forks source link

MosaikMerge Error 'Tags have not been implemented yet' #36

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago 
What steps will reproduce the problem?
1. MosaikBuild -fr 454Run1_1.fna -fq 454Run1_1.qual -st 454 -out 454Run1_1.dat 
and the same for Run1_2 fna and qual files
2. MosaikAligner -in 454Run1_1.dat -out 454Run1_1_aligned.dat  -ia
reference.dat -hs 15 -act 55 -bw 51 -mmp 0.05 -p 16 -j reference_15
3. MosaikMerge -in 454Run1_1_aligned.dat -in 454Run1_2_aligned.dat -out
454Run1_aligned.dat

What is the expected output? What do you see instead?
Expect a merged .dat file, get the error 

- phase 1 of 2: serialize alignments:
 0% [                                                                     
                                                       ]                  
                    |ERROR: Tags have not been implemented yet.

What version of the product are you using? On what operating system?
MosaikMerge 1.0.1388 pre-build 64bit binaries used on Kubunutu 9.1 64bit.

Please provide any additional information below.

Original issue reported on code.google.com by n.r.str...@gmail.com on 19 Feb 2010 at 8:43

GoogleCodeExporter commented 8 years ago 
I see this was reported 19th of february. Quite a while ago. Was this ever 
solved? Im having the same problem with illumina runs.

Original comment by dilorenz...@gmail.com on 3 Feb 2011 at 2:54

GoogleCodeExporter commented 8 years ago 
Just an update from my side, i ran MosaikSort on the files before MosaikMerge 
and that seems to have been the problem..

Original comment by dilorenz...@gmail.com on 4 Feb 2011 at 8:27