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hackseq / October_2016

Planning repository for Genomics Hackathon in Vancouver
http://www.hackseq.com/
Creative Commons Zero v1.0 Universal
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Docker Bioinformatics image #29

Closed sjackman closed 7 years ago

sjackman commented 8 years ago

There's a project at the BCGSC to build a Docker image containing all the bioinformatics software in Homebrew/science named ORCA, and I think it could be useful for HackSeq. There's a demo server at the GSC running this image, and we can make use of it for low-to-medium-resource jobs for HackSeq. If you would like an account on this machine to test it out, send me a private message (e-mail or Twitter @sjackman).

sjackman commented 8 years ago

Here's the ORCA web page: http://www.bcgsc.ca/services/orca/ ORCA: genOmics Research Container Architecture ORCA is a platform for bioinformatics analysis. It is suited for those wishing to conduct self-serve analysis using their own existing data.

BrunoGrandePhD commented 8 years ago

Could the Mosh mobile shell be added to the list of software included with the Docker image? It would be a nice safeguard in case of crappy Wi-Fi in LSI.

sjackman commented 7 years ago

brew install mobile-shell Does it work on ORCA? I didn't test it. I'd like to know.

BrunoGrandePhD commented 7 years ago

I didn't end up using mosh. Just ssh.