I got some error during runing post-process.py. This following is the error:
$ ./post_process.py
Generating ../../data/output/dbs/Test_Test_alpha0.5_window1e6.db...
Creating weights table...
Creating extra table...
Creating construction table...
Creating meta_data table...
Commiting...
Done.
Filtering Test on significance.
Error in smooth.spline(lambda, pi0, df = smooth.df) :
missing or infinite values in inputs are not allowed
Calls: package_db -> qvalue -> pi0est -> smooth.spline
In addition: Warning messages:
1: In min(p) : no non-missing arguments to min; returning Inf
2: In max(p) : no non-missing arguments to max; returning -Inf
3: In min(p) : no non-missing arguments to min; returning Inf
4: In max(p) : no non-missing arguments to max; returning -Inf
Execution halted
It look like the weight table in unfilter SQLiteDB have blank p.value and other 4 last values as well.
Hello,
I got some error during runing post-process.py. This following is the error: $ ./post_process.py Generating ../../data/output/dbs/Test_Test_alpha0.5_window1e6.db... Creating weights table... Creating extra table... Creating construction table... Creating meta_data table... Commiting... Done. Filtering Test on significance. Error in smooth.spline(lambda, pi0, df = smooth.df) : missing or infinite values in inputs are not allowed Calls: package_db -> qvalue -> pi0est -> smooth.spline In addition: Warning messages: 1: In min(p) : no non-missing arguments to min; returning Inf 2: In max(p) : no non-missing arguments to max; returning -Inf 3: In min(p) : no non-missing arguments to min; returning Inf 4: In max(p) : no non-missing arguments to max; returning -Inf Execution halted
It look like the weight table in unfilter SQLiteDB have blank p.value and other 4 last values as well.
Thanks, Phuwanat