haowulab / DSS

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coverage, prior (-3,1) #36

Open BeatrizFaustino opened 1 year ago

BeatrizFaustino commented 1 year ago

Hello, when running the DMA analysis, few DMRs and the following message appear: In est.prior .BSseq.logN(X, N): The coverages are too low. Cannot get good estimations of prior. Use arbitrary prior N(-3,1). How can I resolve this? Thank you very much in advance

haowulab commented 1 year ago

This is fine. Just a warning message. You can’t do much about this, it’s caused by the data (low coverage).

From: B13F @.> Reply-To: haowulab/DSS @.> Date: Wednesday, May 10, 2023 at 11:11 PM To: haowulab/DSS @.> Cc: Subscribed @.> Subject: [External] [haowulab/DSS] coverage, prior (-3,1) (Issue #36)

Hello, when running the DMA analysis, few DMRs and the following message appear: In est.prior .BSseq.logN(X, N): The coverages are too low. Cannot get good estimations of prior. Use arbitrary prior N(-3,1). How can I resolve this? Thank you very much in advance

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