haowulab / DSS

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unbalanced number of replicates #46

Open LandiMi2 opened 2 months ago

LandiMi2 commented 2 months ago

Hello, I do have an unbalanced number of replicates for my conditions. Can I read these unbalanced numbers of replicates as one, say, one condition A has 5 replicates and the other B has 3 replicates? Use these conditions A and B as pooled data, so I run the analysis as A and B to compare methylation between these groups. will DSS handle this kind of bias?