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harry-thorpe / piggy

Pipeline for analysing intergenic regions in bacteria
GNU General Public License v3.0
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Unrecognized escape \R #12

Closed EricDeveaud closed 7 years ago

EricDeveaud commented 7 years ago

hello,

I have various warning while running piggy

Unrecognized escape \R passed through at /local/gensoft2/exe/piggy/1.0/libexec/piggy_core_alignment_creator.pl line 34.

don't have time right now to check it, maybe https://stackoverflow.com/questions/39090265/unrecognized-escape-r-passed-through-at-test-pl-line-7 can help

regards

Eric

harry-thorpe commented 7 years ago

Hi Eric,

This is a catchall newline character (\n \r \r\n) implemented in perl 5.10.0. I have changed it to search for these separately, so should work now.

Thanks,

Harry

EricDeveaud commented 7 years ago

thanks for all the fixes.

maybe this worth a new release ?

Eric