hartleys
commented
6 years ago UniqueGene + AmbigGene + NoGene =1.
All the others are subsets of one of those 3, as indicated by their name.
So, for example, "no gene, intronic" is a subset of "no gene", since we only count a read as belonging to a gene if it appears on an exon.
On Mar 2, 2018 11:29 AM, "shao" notifications@github.com wrote:
I have a naive question on the " Mapping location rates" plot. Basically, how should I understand and add the rates of each categories? For example, in the plot: https://hartleys.github.io/QoRTs/archive/v1.0.22/QoRTs-vigne tte/node9.html#subsec:plotDesc-14d If simplely sum the rate of each categories, then the total rate will be larger than 1. My questions are:-
- Is the "unique gene UTR" already included in the "unique gene"?
- Are all "No gene XXX" are included in "No Gene" group?
- "Unique Gene" + "Ambig gene" + "No Gene" = 1? Thanks for your help.
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ccshao
I have a naive question on the " Mapping location rates" plot. Basically, how should I understand and add the rates of each categories? For example, in the plot: https://hartleys.github.io/QoRTs/archive/v1.0.22/QoRTs-vignette/node9.html#subsec:plotDesc-14d If simplely sum the rate of each categories, then the total rate will be larger than 1. My questions are:-