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hexylena
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argparse2tool
transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
Apache License 2.0
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10
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OutputParameter does not exist, it's OutputData. Also switch to GH Actions
#73
hexylena
closed
2 years ago
0
fix flake errors
#72
bernt-matthias
closed
3 years ago
0
always exit when generating cwl from click
#71
bernt-matthias
closed
3 years ago
2
Add --command argument also to galaxy part
#70
bernt-matthias
closed
3 years ago
0
make loading of original module work also for environments containing "argparse2tool"
#69
bernt-matthias
closed
4 years ago
0
relocate argparse and click packages
#68
bernt-matthias
closed
4 years ago
8
Deployment updates
#67
hexylena
closed
4 years ago
0
Update to py3.6 testing and include license in package
#66
bernt-matthias
closed
4 years ago
2
[WIP]: changes that accumulate during working on checkm parsers
#65
bernt-matthias
opened
4 years ago
2
Last Python 2.7 supported release will be on 2020-01-01 (or before)
#64
mr-c
opened
5 years ago
4
some improvements
#63
bernt-matthias
closed
6 years ago
0
possible improvements
#62
bernt-matthias
opened
6 years ago
1
galaxy subparser parity with cwl
#61
hexylena
closed
4 years ago
5
subparser parents
#60
bernt-matthias
opened
6 years ago
6
invalid email, reducing to just the original
#59
hexylena
closed
6 years ago
0
sub parser tests
#58
hexylena
closed
6 years ago
0
No output with --generate_cwl_tool when ArgumentParser is instantiated with prog keyword
#57
ksebby
opened
6 years ago
3
fix issue?
#56
hexylena
closed
7 years ago
0
modify cwl templates to output an empty array when no tool inputs
#55
hmenager
closed
7 years ago
2
[galaxy] select field does not maintain ordering
#54
hexylena
opened
7 years ago
0
Modify short description of the repository
#53
anton-khodak
closed
7 years ago
0
PR policy?
#52
mr-c
closed
7 years ago
6
[CWL] implement custom types and custom actions using strings
#51
mr-c
opened
7 years ago
0
[CWL] ignore const
#50
mr-c
opened
7 years ago
0
[CWL] implement nargs=N
#49
mr-c
opened
7 years ago
0
[CWL] implement mutual exclusion
#48
mr-c
opened
7 years ago
0
[CWL] Argparse argument groups can be represented with a CWL custom record type
#47
mr-c
opened
7 years ago
0
Argparse2galaxy select field
#46
anton-khodak
closed
7 years ago
3
Revert "cwlVersion: v1.0 is good enough"
#45
anton-khodak
closed
7 years ago
0
single CWL optional types should use ? syntax
#44
mr-c
opened
7 years ago
0
cwlVersion: v1.0 is good enough
#43
mr-c
closed
7 years ago
2
correct foo parameter type
#42
hmenager
closed
7 years ago
1
Fix Travis checks
#41
anton-khodak
closed
7 years ago
6
handle if ArgumentParser.print_version() absent
#40
hmenager
closed
7 years ago
8
map by default parameter types to string
#39
hmenager
closed
7 years ago
3
Update galaxyxml
#38
hexylena
closed
7 years ago
0
import `future` only when needed
#37
anton-khodak
opened
7 years ago
0
compare argcomplete's method for argparse introspection
#36
mr-c
opened
7 years ago
3
'str' type is not used in CWL v1.0.20161128202906 (RDFLib 4.2.1)
#35
MatthewRalston
closed
7 years ago
1
convert py3 tests to py2 compatible versions
#34
mr-c
opened
7 years ago
0
Update release process
#33
hexylena
closed
7 years ago
0
Merge argparse2cwl + gxargparse
#32
anton-khodak
closed
7 years ago
6
[WIP] merge in CWL functionality
#31
mr-c
closed
8 years ago
1
error: unrecognized arguments: --generate-galaxy-xml
#30
alexlenail
closed
8 years ago
3
Is gxargparse installed or not?
#29
alexlenail
closed
8 years ago
2
Uninstall?
#28
alexlenail
closed
8 years ago
2
[WIP] CWL refactor
#27
mr-c
closed
8 years ago
1
use longest option name
#26
mr-c
closed
9 years ago
4
inherit from the real ArgumentParser
#25
mr-c
closed
9 years ago
6
Attribute ordering on XML
#24
hexylena
opened
9 years ago
1
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