I had tried to compile SPP 1.14 on a Debian testing machine that had gcc 6.1 installed on it.
In the process I discovered that ext/hash_map and ext/hash_set had been deprecated and replaced with unordered_map and unordered_set.
After updating the templates used I also tried compiling on a system with gcc 5.3 and discovered that versionneeds -std=c++11 to enable the new templates.
I also removed the using namespace __gnu_cxx since these patches use standard templates.
My testing (done before I'd removed all the use namespace __gnu_cxx) was to run a chipseq and its control through via Anshul's run_spp.R script.
Hi,
I had tried to compile SPP 1.14 on a Debian testing machine that had gcc 6.1 installed on it.
In the process I discovered that ext/hash_map and ext/hash_set had been deprecated and replaced with unordered_map and unordered_set.
After updating the templates used I also tried compiling on a system with gcc 5.3 and discovered that versionneeds -std=c++11 to enable the new templates.
I also removed the using namespace __gnu_cxx since these patches use standard templates.
My testing (done before I'd removed all the use namespace __gnu_cxx) was to run a chipseq and its control through via Anshul's run_spp.R script.
Diane Trout