Closed hzovaro closed 10 months ago
Running the following:
if __name__ == "__main__": from spaxelsleuth import load_user_config try: load_user_config("/Users/u5708159/Desktop/spaxelsleuth_test/.myconfig.json") except FileNotFoundError: load_user_config("/home/u5708159/.spaxelsleuthconfig.json") from spaxelsleuth.loaddata.s7 import make_s7_metadata_df, make_s7_df, load_s7_metadata_df, load_s7_df nthreads = 4 eline_SNR_min = 3 eline_ANR_min = 3 # Create the DataFrames make_s7_metadata_df() make_s7_df(gals=["NGC1068", "MARK573", "NGC6860"], eline_SNR_min=eline_SNR_min, eline_ANR_min=eline_ANR_min, correct_extinction=True, metallicity_diagnostics=["N2Ha_PP04",], nthreads=nthreads)
Produces the following output:
File ~/python/Modules/spaxelsleuth/spaxelsleuth/loaddata/s7.py:665, in make_s7_df(eline_SNR_min, eline_ANR_min, correct_extinction, gals, sigma_gas_SNR_min, line_flux_SNR_cut, missing_fluxes_cut, line_amplitude_SNR_cut, flux_fraction_cut, sigma_gas_SNR_cut, vgrad_cut, metallicity_diagnostics, nthreads) 663 logger.info(f"beginning pool...") 664 pool = multiprocessing.Pool(min([nthreads, len(gals)])) --> 665 res_list = np.array((pool.map(_process_s7, args_list))) 666 pool.close() 667 pool.join() ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 2 dimensions. The detected shape was (3, 3) + inhomogeneous part.
The error does not occur if nthreads = 1.
Running the following:
Produces the following output:
The error does not occur if nthreads = 1.