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ices-eg / wg_WGEEL

Joint EIFAAC/ICES/GFCM Working Group on Eels
http://ices.dk/community/groups/Pages/WGEEL.aspx
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standardisation of recruitment #365

Open elfunesto opened 1 month ago

elfunesto commented 1 month ago

when making the standardisation of recruitment series before fitting the glm, we divide by the mean of the series whithout dicscarding das_qal_id > 4 For 2025, we should change wger[!is.na(wger$das_qal_id) & wger$das_qal_id==3,c("value")] <- NA

for wger[!is.na(wger$das_qal_id) & (wger$das_qal_id==3 | wger$das_qal_id >4),c("value")] <- NA

in R/recruitment/utilities.R

elfunesto commented 1 month ago

we whould also add a flag in compute_retro_analysis to be able to manage the two versions