Hi all, thanks for the great package, I'm enjoying it a lot!
It might be a quite naive question: is there a possibility to analyze CDR3 lengths as a proportion/frequency instead as clonotype number?
I have a set of samples with varying clone numbers and different clonotype proportions (some highly expanded clonotypes) and think that it could be useful to display the y-axis as proportion. Is this possible?
Small edit: I guess what I am trying to generate is a CDR3 length distribution plot that is weighted for clonotype size, i.e. that highly expanded clonotypes contribute more to the distribution compared to clonotypes of small proportion. Does that make sense?
Hi all, thanks for the great package, I'm enjoying it a lot! It might be a quite naive question: is there a possibility to analyze CDR3 lengths as a proportion/frequency instead as clonotype number? I have a set of samples with varying clone numbers and different clonotype proportions (some highly expanded clonotypes) and think that it could be useful to display the y-axis as proportion. Is this possible?
Small edit: I guess what I am trying to generate is a CDR3 length distribution plot that is weighted for clonotype size, i.e. that highly expanded clonotypes contribute more to the distribution compared to clonotypes of small proportion. Does that make sense?