inab / openEBench-nuxt

Vue Client for the OpenEBench Micro Frontends
https://openebench.bsc.es/
Apache License 2.0
2 stars 2 forks source link

Metadata replies cannot be imported to SMWizard #612

Closed EvaMart closed 5 months ago

EvaMart commented 5 months ago

Example of data that fails:

{
    "@context": {
        "bs": "https://bioschemas.org/terms/",
        "codemeta": "https://w3id.org/codemeta/",
        "maSMP": "https://discovery.biothings.io/view/maSMP/",
        "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
        "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
        "schema": "http://schema.org/"
    },
    "@id": "https://openebench.bsc.es/bioschemas/tools/observatory:metabolicatlas:None/web",
    "@type": "schema:SoftwareApplication",
    "codemeta:referencePublication": [
        {
            "@id": "https://doi.org/10.1126/scisignal.aaz1482",
            "@type": "schema:CreativeWork",
            "schema:name": "An atlas of human metabolism. ",
            "schema:url": "https://doi.org/10.1126/scisignal.aaz1482"
        },
        {
            "@id": "https://doi.org/10.1073/pnas.2102344118",
            "@type": "schema:CreativeWork",
            "schema:name": "Genome-scale metabolic network reconstruction of model animals as a platform for translational research. ",
            "schema:url": "https://doi.org/10.1073/pnas.2102344118"
        },
        {
            "@id": "https://doi.org/10.1093/nar/gkac831",
            "@type": "schema:CreativeWork",
            "schema:name": "GotEnzymes: an extensive database of enzyme parameter predictions",
            "schema:url": "https://doi.org/10.1093/nar/gkac831"
        },
        {
            "@id": "https://doi.org/10.1093/database/bav068",
            "@type": "schema:CreativeWork",
            "schema:name": "Human metabolic atlas: an online resource for human metabolism",
            "schema:url": "https://doi.org/10.1093/database/bav068"
        }
    ],
    "schema:additionalType": "web",
    "schema:applicationCategory": "web",
    "schema:applicationSubcategory": [
        "edam:topic_2259"
    ],
    "schema:author": [
        {
            "@type": "schema:Person",
            "schema:name": "Mihail Anton"
        }
    ],
    "schema:dateModified": "2024-05-28T14:34:00Z",
    "schema:description": "Metabolic atlas is a web platform integrating open-source genome scale metabolic models (gems) for easy browsing and analysis. the goal is to collect curated gems, and to bring these models closer to fair principles. the website provides visualisations and comparisons of the gems, and links to resources, algorithms, other databases, and more general software applications. metabolic atlas is intended to be used for applications in metabolomics, clinical chemistry, biomarker discovery and general education. in short, the vision is to create a one-stop-shop for everything metabolism related.",
    "schema:featureList": [
        "edam:operation_3926",
        "edam:operation_0533",
        "edam:operation_0571",
        "edam:operation_0573"
    ],
    "schema:license": [
        {
            "@type": "schema:CreativeWork",
            "schema:name": "GPL-3.0"
        }
    ],
    "schema:name": "metabolicatlas",
    "schema:operatingSystem": [
        "Linux",
        "Windows",
        "macOS"
    ]
}

Solution: You need to use “https://schema.org/” as schema: prefix (not http)…

EvaMart commented 5 months ago

This issue lies in the observatory API

EvaMart commented 5 months ago

Solved in the Observatory API