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inab / openEBench-nuxt

Vue Client for the OpenEBench Micro Frontends
https://openebench.bsc.es/
Apache License 2.0
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[Evaluator] Unable to run tool when using metadata file URL or upload as input #658

Closed abnerbog closed 3 weeks ago

abnerbog commented 2 months ago

Bug description:

The FAIR evaluator tool is unable to calculate FAIR scores when using a metadata file as input.

To reproduce:

  1. Go to the FAIRsoft evaluator app
  2. In Step 1, select 'Metadata file' and 'Enter URL' as the metadata source
  3. Enter the URL: 'https://raw.githubusercontent.com/inab/observatory-api/a825f37ecf6d557c9f7ad892da05ff32cebd35bc/app/helpers/metadata.jsonld'
    • The same issue occurs when uploading the metadata as a file instead of entering a URL

Unexpected output:

When the metadata source is entered as a URL, the tool hangs on step 3:

image

When the metadata source is entered as a file, the tool does not retrieve any metadata and is unable to calculate the FAIR scores.

image

Environment:

Device: Dell laptop (x64)
OS: Windows 11 Pro
Browser: Google Chrome

EvaMart commented 1 month ago

Apologies for the delay; I completely missed this! I'll review it and get back to you soon.

abnerbog commented 1 month ago

Thanks so much! To add some further context here -- I also tried downloading the metadata in JSON-LD format through the evaluator tool in the 'Results' step after using a GitHub URL as input (e.g. 'https://github.com/inab/oeb-visualizations'), and then using this file as input into the evaluator in Step 1. When I go to use the tool with this JSON-LD input, I can proceed to Step 3 ('Edit the metadata if needed') as expected but the tool hangs when attempting to evaluate FAIR indicators in Step 4 ('Results').

EvaMart commented 3 weeks ago

Hi Abner,

Thank you for your feedback. It appears that the file you were trying to upload is in an older format, which is no longer supported. As part of a major update this summer, we modified the tool to use the maSMP format. Unfortunately, this means that files in the previous format are now incompatible—apologies for any inconvenience this may have caused.

I also resolved a few additional issues, and the tool should now work with files in the maSMP format, whether uploaded directly from your local filesystem or through a URL. If you have any questions or run into further issues, please don’t hesitate to reach out 🙏.