incf-nidash / nidmresults-fsl

A python library to export FSL's feat results to NIDM-Results
http://nidm.nidash.org/specs/nidm-results.html
MIT License
3 stars 11 forks source link

Directory saved correctly #127

Closed TomMaullin closed 6 years ago

TomMaullin commented 6 years ago

This is a really quick PR. I believe this fix in part will resolve the error thrown in issue #126 . The main problem lies around the try catch statement on lines 67-88 of fsl_exporter.py.

The problem comes from the fact that the self.cleanup() method on line 87 uses the variable self.export_dir. However, this variable is only assigned during the call to the super class on line 68.

As the call to the superclass is in the try block and the call to the cleanup function is in the except block the variable self.export_dir, I believe this is the cause of the reported error message.

Note: This addresses the specific error in the issue but, as I could not replicate the issue, I cannot tell why this except block was being executed in the first place.

pep8speaks commented 6 years ago

Hello @TomMaullin! Thanks for updating the PR.

Line 1249:80: E501 line too long (88 > 79 characters) Line 1259:80: E501 line too long (249 > 79 characters) Line 1261:80: E501 line too long (143 > 79 characters) Line 1262:31: E231 missing whitespace after ',' Line 1262:74: E231 missing whitespace after ',' Line 1263:31: E231 missing whitespace after ',' Line 1263:80: E501 line too long (123 > 79 characters) Line 1263:116: E231 missing whitespace after ',' Line 1264:31: E231 missing whitespace after ',' Line 1264:76: E231 missing whitespace after ',' Line 1264:80: E501 line too long (83 > 79 characters) Line 1267:80: E501 line too long (114 > 79 characters) Line 1268:80: E501 line too long (145 > 79 characters) Line 1311:37: W291 trailing whitespace Line 1318:20: E714 test for object identity should be 'is not' Line 1321:80: E501 line too long (88 > 79 characters) Line 1333:31: E231 missing whitespace after ',' Line 1333:74: E231 missing whitespace after ',' Line 1336:80: E501 line too long (110 > 79 characters)

Comment last updated on July 23, 2018 at 10:57 Hours UTC
TomMaullin commented 6 years ago

Hi @cmaumet ,

I have just updated this PR so that it can be merged with the main branch. This is only a small edit - please let me know if this is okay with you to merge/if you have any feedback!

cmaumet commented 6 years ago

Okay. Let's merge. Thanks @TomMaullin.