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ixxmu / mp_duty

抓取网络文章到github issues保存
https://archives.duty-machine.now.sh/
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R语言画图 | 热图复现笔记 #5632

Closed ixxmu closed 2 months ago

ixxmu commented 2 months ago

https://mp.weixin.qq.com/s/XVndfoLf5EfRviqMFbO7eg

ixxmu commented 2 months ago

R语言画图 | 热图复现笔记 by 被炸熟的虾

给大家分享几款大佬复现的高分杂志热图，都是值得记录的画图模板。点击图片即可跳转。

一、Cancer Cell同款

Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness. Cancer Cell. 2023 Jan 9. PMID: 36563681.

二、Int J Biol Sci同款

通过相关性热图来说明：在转录层面，ACADL（脂肪代谢的关键酶）与多种CAF（癌症相关成纤维细胞）相关基因的mRNA表达水平呈负相关。

Bulk and single-cell transcriptome profiling reveal extracellular matrix mechanical regulation of lipid metabolism reprograming through YAP/TEAD4/ACADL axis in hepatocellular carcinoma. Int J Biol Sci. 2023 Apr 9; PMID: 37151879.

三、Molecular Therapy同款

有意思的地方在于只展示部分基因

Single-cell dissection of cellular and molecular features underlying mesenchymal stem cell therapy in ischemic acute kidney injury. Mol Ther. 2023 Oct 4;PMID: 37533253.

四、Cell同款 |  标记基因

ComplexHeatmap包绘制，行列均分组注释

The local microenvironment drives activation of neutrophils in human brain tumors. Cell. 2023 Oct 12; PMID: 37769657.


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