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jdblischak
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singleCellSeq
Batch effects and the effective design of single-cell gene expression studies
http://jdblischak.github.io/singleCellSeq/analysis
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Cell cycle score
#59
ateissan
opened
4 years ago
7
A query about dealing with bam files
#58
WT215
closed
5 years ago
2
A query about the usage of umitools
#57
WT215
closed
5 years ago
3
Publish data on bioconductor?
#56
mbuttner
opened
6 years ago
2
edit methods
#55
jhsiao999
closed
7 years ago
0
Joyce's edits in response to reviewer's comments
#54
jhsiao999
closed
7 years ago
0
replace c1 plate figure
#53
jhsiao999
closed
8 years ago
0
update supp fig.7 source
#52
jhsiao999
closed
8 years ago
0
Fix *pois.Rmd and *pois-dropout.Rmd
#51
jhsiao999
closed
8 years ago
0
minor edits
#50
jhsiao999
closed
8 years ago
3
Making changes to reflect the new permutation results
#49
jhsiao999
closed
8 years ago
2
Paper formatting
#48
jdblischak
closed
8 years ago
0
legend edits
#47
jhsiao999
closed
8 years ago
0
minor edits re. variance component analysis
#46
jhsiao999
closed
8 years ago
0
Minor edits plus documenting manual formatting steps.
#45
jdblischak
closed
8 years ago
0
Standardize naming of figures and tables
#44
jdblischak
closed
8 years ago
0
minor edits (David's comments)
#43
jhsiao999
closed
8 years ago
0
Update descriptions of LCL subsampling results.
#42
jdblischak
closed
8 years ago
0
Merge Joyce's Discussion paragraph on gene regulatory noise
#41
jdblischak
closed
8 years ago
2
discussion paragraph
#40
jhsiao999
closed
8 years ago
2
Discussion edits
#39
jdblischak
closed
8 years ago
0
Update subsampling text
#38
jdblischak
closed
8 years ago
0
Update subsampling analyses
#37
jdblischak
closed
8 years ago
0
paper edits
#36
jhsiao999
closed
8 years ago
0
Paper edits
#35
jdblischak
closed
8 years ago
0
edit Joyce's author name
#34
jhsiao999
closed
8 years ago
0
update discussion
#33
jhsiao999
closed
8 years ago
0
add cell-cell variation discussion
#32
jhsiao999
closed
8 years ago
0
add permutation test threshold
#31
jhsiao999
closed
8 years ago
0
paper updates
#30
jhsiao999
closed
8 years ago
0
percent variation analysis
#29
jhsiao999
closed
8 years ago
0
update paper additional analysis
#28
jhsiao999
closed
8 years ago
0
additional analysis for the paper, also upload bayesian variance esti…
#27
jhsiao999
closed
8 years ago
0
batch effect analysis
#26
jhsiao999
closed
8 years ago
0
Title page and some document formatting
#25
jdblischak
closed
8 years ago
0
number of genes included in the cell-cycle computation
#24
jhsiao999
closed
8 years ago
0
Some minor edits to paper.
#23
jdblischak
closed
8 years ago
0
change from plotting-function.r to plotting-function.R
#22
jhsiao999
closed
8 years ago
0
edit chosen-genes.pdf
#21
jhsiao999
closed
8 years ago
0
bio variation section edits
#20
jhsiao999
closed
8 years ago
1
add bio figure pngs
#19
jhsiao999
closed
8 years ago
0
minor edits
#18
jhsiao999
closed
8 years ago
0
upload summary of results, tidy up biological analysis notes
#17
jhsiao999
closed
8 years ago
2
update biological variation analysis
#16
jhsiao999
closed
8 years ago
0
Analysis of expressed cells
#15
jhsiao999
closed
8 years ago
4
Paper edits
#14
jdblischak
closed
8 years ago
0
update results rda of biological variation analysis (small rdas)
#13
jhsiao999
closed
8 years ago
0
update figure6
#12
jhsiao999
closed
8 years ago
2
Edits to Poisson GLM description
#11
davidaknowles
closed
8 years ago
1
Add supplemental figures
#10
jhsiao999
closed
8 years ago
0
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