jlmelville uwot issues - Githubissues

jlmelville / uwot

An R package implementing the UMAP dimensionality reduction method.

https://jlmelville.github.io/uwot/

GNU General Public License v3.0

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issues

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if batch = TRUE in training, fgraph of umap_transform is transposed if n_epoch is set to NULL

#129 PedroMilanezAlmeida opened 2 months ago
0
unrealistic point predict

#128 mytarmail closed 3 months ago
3
Seurat UMAP crashing with high numbers of cells

#126 ollieeknight opened 4 months ago
6
Error installing uwot into R-4.3.3 of centos-7.9

#125 dfgao opened 6 months ago
1
Error on installing uwot under Microsoft R-4.1.2

#124 yingyin2019 opened 6 months ago
2
Umap2

#123 jlmelville closed 7 months ago
0
UMAP trustworthiness and continuity?

#122 davidechicco opened 7 months ago
1
Found more than one class "dist" in cache

#121 AndiMunteanu closed 7 months ago
4
rnndescent support

#120 jlmelville closed 8 months ago
0
HNSW support

#119 jlmelville closed 8 months ago
0
if batch = TRUE in training, fgraph of umap_transform is transposed if n_epoch is set to 0

#118 PedroMilanezAlmeida opened 8 months ago
8
umap_transform uses a different distance metric if loaded in

#117 mdrnao closed 8 months ago
5
maybe unintended data use in examples

#116 topepo closed 8 months ago
2
irlba as_cholmod_sparse problems

#115 jlmelville opened 1 year ago
1
dgCMatrix_colSums' not found error when using a binary matrix

#114 rfarouni closed 8 months ago
2
umap_transform with seurat umap coordinate

#113 TuoCai2000 closed 8 months ago
2
Make one more AnnoyIndex use be Annoy::AnnoyIndex

#112 eddelbuettel closed 1 year ago
6
Accomodate updated (Rcpp)Annoy and the added Annoy namespace

#111 eddelbuettel closed 1 year ago
6
Reproducibility issue with the same data and OS

#110 SuhasSrinivasan closed 1 year ago
17
I can not load the saved model, an example from the help

#109 mytarmail closed 8 months ago
9
devtools can no longer build uwot on Windows

#108 jlmelville closed 1 year ago
5
What C++ version should CXX_STD have?

#107 jlmelville opened 1 year ago
17
Weird looking UMAP for spectral flow data

#106 fingeram closed 1 year ago
3
Citing {uwot}

#105 nspies13 closed 1 year ago
1
umap transform fuzzy graph

#104 PedroMilanezAlmeida closed 2 years ago
3
umap_transform can give odd results with dens_scale

#103 FemkeSmit closed 8 months ago
17
umap_transform causes R Studio to abort (R encountered a fatal error.)

#102 ChVav closed 2 years ago
4
Add general_simplicial_set_intersection to the uwot API

#101 jlmelville closed 8 months ago
3
Test failure an arm64, ppc64el and s390x

#100 lucaskanashiro opened 2 years ago
8
Range scale input before optimization

#99 jlmelville closed 8 months ago
2
How to input similarity_graph back into umap parameters?

#98 Chengwei94 closed 8 months ago
3
Differences in model parameters when calling umap() causes umap_transform() to error

#97 AustinHartman closed 2 years ago
3
`fuzzy_simplicial_set()` for BBKNN

#96 ycli1995 closed 2 years ago
5
retrieve umap parameters

#95 kjiang18 closed 8 months ago
2
Does uwot need connecting internet?

#94 summerghw closed 8 months ago
4
Licensing model for uwot and umappp

#93 dsudar closed 8 months ago
3
Support binary metric

#92 frederikziebell opened 2 years ago
2
Can't install on CentOS server machine

#91 MiguelRodo closed 2 years ago
2
Help needed . How to parallel RcppANNOY

#90 jianshu93 closed 1 year ago
1
Optimization of n_components and spread

#89 felipe-mansoldo closed 2 years ago
2
Saving a loaded uwot model

#88 ilyakorsunsky closed 8 months ago
2
use Rcpphnsw instead of Rcppannoy to accelerate nearest neighbor search

#87 jianshu93 opened 2 years ago
20
check_graph in umap_transform

#86 yuhanH closed 2 years ago
2
Behavior with equidistant data

#85 jlmelville closed 2 years ago
5
batch mode with Adam optimization

#84 jlmelville closed 3 years ago
0
Parallelizing the optimization step (redux)

#83 LTLA closed 3 years ago
27
Order of elements is not preserved in subgraph_init

#82 LTLA closed 3 years ago
3
keep the rownames

#81 jwijffels closed 3 years ago
7
Rolling out uwot's C++ code as a header-only library

#80 LTLA opened 3 years ago
10
3 questions from running this online tutorial

#79 jielab closed 3 years ago
4