Enhance chromosome name check function

jlw-laputa / ngsplot

Automatically exported from code.google.com/p/ngsplot

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Enhance chromosome name check function #25

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago

Right now, it considers the chromosome names in a bam file to be either have 
"chr" or not at all. This has caused trouble for some people who have a mix of 
chromosome names in their bam files. A little flexibility is desired.

Original issue reported on code.google.com by shenli.sam on 31 Jul 2014 at 4:29