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jmcbroome
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BTE
Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit
https://jmcbroome.github.io/BTE/build/html/index.html
MIT License
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is `conda` package out of date?
#22
jbloom
opened
4 months ago
1
alternative codon incorrectly computed in context of multi-nucleotide mutation?
#21
Haddox
opened
9 months ago
1
zsh: segmentation fault
#20
qjabiri
closed
9 months ago
1
Function renaming, branch length setting, and LCA fetching
#19
jmcbroome
closed
1 year ago
0
Branch length issues
#18
theosanderson
closed
1 year ago
3
feat: write_newick should write to a file or be renamed
#17
theosanderson
closed
1 year ago
1
Usability Improvements
#16
jmcbroome
closed
1 year ago
0
Organize functions around getting/setting annotations
#15
jmcbroome
closed
1 year ago
0
docs: get_string>aa_string
#14
theosanderson
closed
1 year ago
5
VS code ipynb notebooks
#13
theosanderson
closed
1 year ago
3
Arm64 builds
#12
theosanderson
opened
1 year ago
7
New Functionality
#11
jmcbroome
opened
1 year ago
0
Allow automatic gzipping of output PB
#10
jmcbroome
closed
1 year ago
1
Update BTE Binder to latest version
#9
jmcbroome
opened
2 years ago
0
Update all functions to take/return plain Python strings instead of using bytes sometimes
#8
jmcbroome
closed
1 year ago
1
AAChange repr tries to access a deprecated (?) attribute
#7
jmcbroome
closed
2 years ago
1
Attempting to write a json with metadata causes a massive memory leak
#6
jmcbroome
closed
2 years ago
2
Trying to get a node that doesn't exist yields a confusing error message about missing parents
#5
jmcbroome
closed
2 years ago
1
Passing missing file to translate causes segfault
#4
jmcbroome
closed
2 years ago
1
Translation
#3
jmcbroome
closed
2 years ago
0
Newick-only Mode and Many Adjustments
#2
jmcbroome
closed
2 years ago
0
add c++17 compiler option
#1
amkram
closed
2 years ago
0