jr-leary7 / scLANE

Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
MIT License
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Speed up GEE mode #241

Open jr-leary7 opened 1 month ago

jr-leary7 commented 1 month ago
jr-leary7 commented 1 month ago

commit cff92ec addresses this to some extent ... still more to be done though

jr-leary7 commented 1 month ago

summary: Eigen matrix multiplication is faster than that of Matrix, replaced usage of summary.gamlss() with more efficient version complete with error handling, and replaced stats::lm.fit() with RcppEigen::fastLmPure()