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jts / nanopolish

Signal-level algorithms for MinION data
MIT License
550 stars 160 forks source link

Error installing dependencies? #1122

Closed ZachChua closed 5 months ago

ZachChua commented 5 months ago

Hi,

I am trying to set up nanopolish on Windows 10:

I have successfully downloaded the latest version from github as follows: git clone --recursive https://github.com/jts/nanopolish.git

But when I enter the following: cd nanopolish make

The following errors appear: process_begin: CreateProcess(NULL, uname -s, ...) failed. if [ ! -e hdf5-1.8.14.tar.gz ]; then \ version_major_minor=echo "1.8.14" | sed -E 's/\.[0-9]+$//'; \ wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${version_major_minor}/hdf5-1.8.14/src/hdf5-1.8.14.tar.gz; \ fi ! was unexpected at this time. make: *** [lib/libhdf5.a] Error 255

I am unsure what I'm doing wrong. It'll be great if I could get some help regarding this. Thank you.

Zachary Chua

jts commented 5 months ago

Sorry but nanopolish does not work on Windows.

ZachChua commented 5 months ago

Thanks for the clarification!