Apologies if this is not after all a nanopolish issue, I have followed the instructions (git clone, make) on linux OS. Installation seems to go fine (with all the expected warnings etc) but when I then try to use it (e.g. nanopolish --version) it errors with "nanopolish: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory". When I use find on "libhdf5*" within the installed nanopolish directory it only turns up the following:
Hi,
Apologies if this is not after all a nanopolish issue, I have followed the instructions (git clone, make) on linux OS. Installation seems to go fine (with all the expected warnings etc) but when I then try to use it (e.g. nanopolish --version) it errors with "nanopolish: error while loading shared libraries: libhdf5.so.10: cannot open shared object file: No such file or directory". When I use find on "libhdf5*" within the installed nanopolish directory it only turns up the following:
./hdf5-1.8.14/config/cmake/libhdf5.settings.cmake.in ./hdf5-1.8.14/src/libhdf5.settings ./hdf5-1.8.14/src/libhdf5.la ./hdf5-1.8.14/src/.libs/libhdf5.so.9.0.0 ./hdf5-1.8.14/src/.libs/libhdf5.so.9 ./hdf5-1.8.14/src/.libs/libhdf5.so ./hdf5-1.8.14/src/.libs/libhdf5.la ./hdf5-1.8.14/src/.libs/libhdf5.lai ./hdf5-1.8.14/src/.libs/libhdf5.a ./hdf5-1.8.14/src/libhdf5.settings.in ./lib/libhdf5.so.9.0.0 ./lib/libhdf5.settings ./lib/libhdf5.so.9 ./lib/libhdf5.so ./lib/libhdf5.la ./lib/libhdf5.a
I'm not sure what I'm missing here? Any help appreciated!