kishwarshafin / pepper

PEPPER-Margin-DeepVariant
MIT License
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Deepvariant pepper settings for duplex calling #186

Open alvinwt opened 1 year ago

alvinwt commented 1 year ago

Hi @kishwarshafin , great tool, I am trying to test deepvariant pepper on some duplex sequencing data. Would --ont_r10_q20 work with duplex? If not if you have another config it would be really helpful!

Best wishes, Alvin