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krumsieklab / maplet

R statistical toolbox for metabolomics
GNU General Public License v3.0
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Validate external, custom SummarizedExperiment objects #135

Open KelseyChetnik opened 3 years ago

KelseyChetnik commented 3 years ago

In GitLab by @krumsiek on Aug 29, 2020, 14:36

Users of the pipeline might supply their own SummarizedExperiment to a pipeline. We need a function to make sure that it complies with the required internal format.

Aspects to check (list to be extended):

  1. rownames of SummarizedExperiment need to be valid variable names.
KelseyChetnik commented 3 years ago

In GitLab by @krumsiek on Aug 29, 2020, 14:36

changed the description